BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2030.1
(238 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [A... 349 e-119
KYP58720.1 Retrovirus-related Pol polyprotein from transposon TN... 338 e-113
KYP43701.1 Retrovirus-related Pol polyprotein from transposon TN... 325 e-110
>ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 349 bits (895), Expect = e-119, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 193/235 (82%), Gaps = 2/235 (0%)
Query: 1 MDTSYPLSTPMVVRSLDTVKDPYRPKEDNEALLGPEVPYLSAIGSLLYFAQCTRPDISFA 60
MD S+PLS+PMVVRSLD KDP+RP+E++E LLGPEVPYLSAIG+L+Y A CTRPDI+F+
Sbjct: 13 MDKSHPLSSPMVVRSLDVEKDPFRPREEHEELLGPEVPYLSAIGALMYLANCTRPDIAFS 72
Query: 61 VNLLVRFSSAPTKRHWMGVKHILRYLRGITNMGLFDSKNSSDDSQVTGYTDAGYLSDPHK 120
VNLL RFSSAPT RHW G+KHILRYL+G + GLF S N SQ+ GY DAGYLSDPHK
Sbjct: 73 VNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFYSNNCG--SQLIGYADAGYLSDPHK 130
Query: 121 GISQTGYVFTSGGTAFSWQSSKQSMPAISSNHSEIIALHEATRECIWLRSIISHIRISCE 180
SQTGY+FT G TA SW+S+KQ++ A SSNH+EI+A+HEA+REC+WLRS+ HIR +C
Sbjct: 131 ARSQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCG 190
Query: 181 LPEITKSPTIIYEDNAACITQIKEGYIKGDRTKHISPKLFFSHHLQKNGGIDSEN 235
L + PTI+YEDNAACI Q+K GYIKGDRTKHISPK FF+H+LQ+NG ID +
Sbjct: 191 LTSNKEVPTILYEDNAACIAQLKGGYIKGDRTKHISPKFFFTHNLQENGDIDVQQ 245
>KYP58720.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 428
Score = 338 bits (868), Expect = e-113, Method: Compositional matrix adjust.
Identities = 156/236 (66%), Positives = 188/236 (79%), Gaps = 2/236 (0%)
Query: 1 MDTSYPLSTPMVVRSLDTVKDPYRPKEDNEALLGPEVPYLSAIGSLLYFAQCTRPDISFA 60
MD S+PL TPMVVRSLD KDP+RP+E +E +LGPEVPYLSAIG+L+Y A TRPDI+FA
Sbjct: 155 MDKSHPLCTPMVVRSLDVNKDPFRPQEKDEEILGPEVPYLSAIGALMYLANYTRPDIAFA 214
Query: 61 VNLLVRFSSAPTKRHWMGVKHILRYLRGITNMGLFDSKNSSDDSQVTGYTDAGYLSDPHK 120
VNLL R+SS+PT+RHW GVK ILRYLRG +MGL S S ++ GY DAGYLSDPH
Sbjct: 215 VNLLARYSSSPTRRHWNGVKQILRYLRGTMDMGLLYSNVSK--PELNGYADAGYLSDPHN 272
Query: 121 GISQTGYVFTSGGTAFSWQSSKQSMPAISSNHSEIIALHEATRECIWLRSIISHIRISCE 180
G SQTGY+FTSGGTA SW+S KQ++ A SSNH+EI+ALHEA+REC+WLRS+I HIR +C
Sbjct: 273 GKSQTGYLFTSGGTAISWRSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCG 332
Query: 181 LPEITKSPTIIYEDNAACITQIKEGYIKGDRTKHISPKLFFSHHLQKNGGIDSENT 236
L + T+IYEDN ACI Q+K+GYIKGDRTKHI PK FF+H LQ+NG I+ +
Sbjct: 333 LSSGKMTSTVIYEDNVACIAQLKDGYIKGDRTKHILPKFFFTHDLQRNGDINVQQV 388
>KYP43701.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 264
Score = 325 bits (834), Expect = e-110, Method: Compositional matrix adjust.
Identities = 150/226 (66%), Positives = 181/226 (80%), Gaps = 2/226 (0%)
Query: 11 MVVRSLDTVKDPYRPKEDNEALLGPEVPYLSAIGSLLYFAQCTRPDISFAVNLLVRFSSA 70
MVVRSLD KDP+RP+E +E +LGPEVPYLSAIG+L+Y A TRPDI+FAVNLL R+SS+
Sbjct: 1 MVVRSLDVNKDPFRPQEKDEEILGPEVPYLSAIGALMYLANYTRPDIAFAVNLLARYSSS 60
Query: 71 PTKRHWMGVKHILRYLRGITNMGLFDSKNSSDDSQVTGYTDAGYLSDPHKGISQTGYVFT 130
PT+RHW GVK ILRYLRG +MGL S S ++ GY DAGYLSDPH G SQTGY+FT
Sbjct: 61 PTRRHWNGVKQILRYLRGTMDMGLLYSNVSK--PELNGYADAGYLSDPHNGKSQTGYLFT 118
Query: 131 SGGTAFSWQSSKQSMPAISSNHSEIIALHEATRECIWLRSIISHIRISCELPEITKSPTI 190
SGGTA SW+S KQ++ A SSNH+EI+ALHEA+REC+WLRS+I HIR +C L + T+
Sbjct: 119 SGGTAISWRSVKQTISATSSNHAEILALHEASRECVWLRSVIQHIRETCGLSSGKMTSTV 178
Query: 191 IYEDNAACITQIKEGYIKGDRTKHISPKLFFSHHLQKNGGIDSENT 236
IYEDNAACI Q+K+GYIKGDRTKHI PK FF+H LQ+NG I+ +
Sbjct: 179 IYEDNAACIAQLKDGYIKGDRTKHILPKFFFTHDLQRNGDINVQQV 224