BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2090.1
(242 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN69982.1 hypothetical protein VITISV_027150 [Vitis vinifera] 240 3e-69
XP_007032220.1 Retrotransposon protein, putative [Theobroma caca... 238 2e-68
XP_007022530.1 Retrotransposon protein, putative [Theobroma caca... 217 4e-62
>CAN69982.1 hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 240 bits (612), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 174/292 (59%), Gaps = 64/292 (21%)
Query: 4 RPSLLNRIVDAQIDHEWCRKQVSLMQETETKFSTGQDGRLGFRGRLYVLADPVLRRDILN 63
RP ++ RIV+AQ+ E+ K DG + F+GRL V D LR ++L
Sbjct: 1056 RPMVIQRIVEAQVHDEFLEK-----------VKAPVDGSVRFKGRLCVPKDVELRNELLA 1104
Query: 64 EAHRSKYTVHPGGNKMYKDLKRQYWWLGMKKDVAEYVRKCNVCQMVKAENRHPS------ 117
+AHR+KYT+HPG KMY+DLKRQ+WW GMK+D+A++V C +CQ VKAE++ P+
Sbjct: 1105 DAHRAKYTIHPGNTKMYQDLKRQFWWSGMKRDIAQFVXNCQICQQVKAEHQRPAGLLQPL 1164
Query: 118 ----------------GLLKTVAH-SGLEMGEYV-------------------------- 134
GL +T + +G+ + E V
Sbjct: 1165 PIPEWKWDNITMDFVIGLPRTRSKKNGVWIQEIVRLHGIPVSIVSDRDPKFTSQFWQSLQ 1224
Query: 135 ----DGLHHSTAFHPQTDGQTERINRVVEDMLRCSILDLGGSWQDHLLLVEFAYNNSHQS 190
L+ STAFHPQTDGQ+ER+ +++EDMLR +LD GG+W D+L L EFAYNNS+QS
Sbjct: 1225 RALGTQLNFSTAFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEFAYNNSYQS 1284
Query: 191 SIGMTPFKALYGRPCRLPLCWTEVGDAKLEGLEVIWDTSEKIALIPSRLQAA 242
SIGM P++ALYGRPCR PLCW E+G+++L G E++ +T+EKI LI +L+ A
Sbjct: 1285 SIGMAPYEALYGRPCRSPLCWIEMGESRLLGPEIVQETTEKIQLIKEKLKTA 1336
>XP_007032220.1 Retrotransposon protein, putative [Theobroma cacao] EOY03146.1
Retrotransposon protein, putative [Theobroma cacao]
Length = 1480
Score = 238 bits (606), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 163/257 (63%), Gaps = 24/257 (9%)
Query: 3 VRPSLLNRIVDAQIDHEWCRKQVSLMQETETK-FSTGQDGRLGFRGRLYVLADPVLRRDI 61
VRP L++RI +AQ E+ K + Q + K F+ G DG L + RLYV LRR+I
Sbjct: 1097 VRPILMDRIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRREI 1156
Query: 62 LNEAHRSKYTVHPGGNKMYKDLKRQYWWLGMKKDVAEYVRKCNVCQMVKAENRHPSGLLK 121
L EAH + Y VHPG KMY+DLK YWW G+K+DVAE+V KC VCQ VKAE++ P+GLL+
Sbjct: 1157 LEEAHMAAYVVHPGALKMYQDLKGVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQ 1216
Query: 122 TVAHSGLEMGEYVDGL-----------------------HHSTAFHPQTDGQTERINRVV 158
+ +E+G Y GL STAFHPQTDGQ+ER + +
Sbjct: 1217 PLPVPRVEVGTYCYGLCNGGAQFTSRFWGKLQEALGTKFDFSTAFHPQTDGQSERTIQTL 1276
Query: 159 EDMLRCSILDLGGSWQDHLLLVEFAYNNSHQSSIGMTPFKALYGRPCRLPLCWTEVGDAK 218
EDMLR ++DLG W+ +L LVEFAYNNS Q+SI M PF+ALYGR CR P+ W EVG+ K
Sbjct: 1277 EDMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERK 1336
Query: 219 LEGLEVIWDTSEKIALI 235
L G E++ D +EKI +I
Sbjct: 1337 LLGPELVQDATEKIHMI 1353
>XP_007022530.1 Retrotransposon protein, putative [Theobroma cacao] EOY14055.1
Retrotransposon protein, putative [Theobroma cacao]
Length = 831
Score = 217 bits (552), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 156/243 (64%), Gaps = 15/243 (6%)
Query: 1 MVVRPSLLNRIVDAQIDHEWCRKQV-SLMQETETKFSTGQDGRLGFRGRLYVLADPVLRR 59
+VRPSLLN+I D Q + RK++ L+ E ++F +D L FR R+ V LR+
Sbjct: 440 FIVRPSLLNQIKDIQRSDDELRKEIQKLIDEGVSEFRLREDNILMFRDRVCVPKGNQLRQ 499
Query: 60 DILNEAHRSKYTVHPGGNKMYKDLKRQYWWLGMKKDVAEYVRKCNVCQMVKAENRHPSGL 119
I+ EAH S Y +HP KMY+ ++ YWW GMK+D+AE+V KC VCQ VKAE++ P G
Sbjct: 500 AIMEEAHSSAYALHPESTKMYRTIRENYWWPGMKRDIAEFVAKCLVCQQVKAEHQRPVGT 559
Query: 120 LKTVAHSGLEMGEYVDGLHHSTAFHPQTDGQTERINRVVEDMLRCSILDLGGSWQDHLLL 179
L++ L + E+ H TDGQ+ER +++EDMLR ++D GSW HL L
Sbjct: 560 LQS-----LPVPEW--KWEH-------TDGQSERTIQIMEDMLRACVMDFLGSWDRHLPL 605
Query: 180 VEFAYNNSHQSSIGMTPFKALYGRPCRLPLCWTEVGDAKLEGLEVIWDTSEKIALIPSRL 239
VEFAYNNS QSSI M P++ALYG+ CR PLCW EVG+ KL +E+I T++KI +I RL
Sbjct: 606 VEFAYNNSFQSSISMAPYEALYGKKCRTPLCWDEVGEKKLCSVELIELTNDKIKVIRERL 665
Query: 240 QAA 242
+ A
Sbjct: 666 KVA 668