BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2160.1
(132 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJB24585.1 hypothetical protein B456_004G152600 [Gossypium raimo... 64 9e-11
XP_002301400.1 hypothetical protein POPTR_0002s16970g [Populus t... 58 4e-08
EEF51318.1 hypothetical protein RCOM_1691130 [Ricinus communis] 54 1e-06
>KJB24585.1 hypothetical protein B456_004G152600 [Gossypium raimondii]
Length = 123
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 1 MEKKRVDQETNIVMSCDCGSPLYDSFVLVSVSHVIERNMMKMMSVPTIDHESSPSKRFTS 60
E ++ + DCGSPLYDS+ LVS+SH+IER++MK+ P + SKR T+
Sbjct: 5 FETHGQNEAATTIGIWDCGSPLYDSYELVSLSHLIERHLMKL---PYL----GGSKRLTT 57
Query: 61 RVSVVVPSDLIMVANEIEEFPNVGYSSESLSLIDLLRKKL---MLKKKKMLIKKMKK 114
PSDL + + + + + S SL++ L + L K+++M K KK
Sbjct: 58 ATRFSYPSDLTLPTIAADSYTSNARAKGSYSLMNSLTEFLGTKFWKRRRMFGHKRKK 114
>XP_002301400.1 hypothetical protein POPTR_0002s16970g [Populus trichocarpa]
EEE80673.1 hypothetical protein POPTR_0002s16970g
[Populus trichocarpa]
Length = 137
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 1 MEKKRVDQ---ETNIVMSCDCGSPLYDSFVLVSVSHVIERNMMKMMSVPTIDHESSPSKR 57
+E K DQ E + D GSPLYDS +VS++HVIER++M ++ P SP K
Sbjct: 5 LEAKTDDQQQEEEKALAIWDLGSPLYDSHEVVSLAHVIERHLMTVLPSPGGSKGFSPKK- 63
Query: 58 FTSRVSVVVPSDLIMVAN--EIEEFPNVGYSSESLSLIDLLRKKLMLKKK 105
S+ SVV P+ I+V+N E V SS+ +L + +R+KL +KKK
Sbjct: 64 -ISQASVVDPA-AILVSNMGSKSETKRVRSSSKLNTLSEFVRRKLRIKKK 111
>EEF51318.1 hypothetical protein RCOM_1691130 [Ricinus communis]
Length = 127
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 11 NIVMSCDCGSPLYDSFVLVSVSHVIERNMMKMMSVPTIDHESSPSKRFTSRVSVVVPSDL 70
NIV DCGSPLYDS+ + SV HVIER+MM + S S SKRF R S
Sbjct: 13 NIVW--DCGSPLYDSYEIASVGHVIERHMMALPS-------SCGSKRFIFRPSFSKQEKG 63
Query: 71 IMVAN 75
+M+ N
Sbjct: 64 VMIKN 68