BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2320.1
(157 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012441923.1 PREDICTED: uncharacterized protein LOC105766925 [... 173 4e-52
KYP36890.1 Retrovirus-related Pol polyprotein from transposon TN... 172 2e-51
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 184 6e-51
>XP_012441923.1 PREDICTED: uncharacterized protein LOC105766925 [Gossypium
raimondii]
Length = 217
Score = 173 bits (439), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 110/148 (74%)
Query: 1 MLDSGASHHMCPNREWFTTYRSIDGGTVILGDDSICKTVGLGTIRIKMHDGVVRTLTDVR 60
+LD G ++HMCPN++WF++ + ++GG V +G+DS CKT+G+GTI++K HDG+++ LTDVR
Sbjct: 9 ILDLGCTYHMCPNKDWFSSLKELEGGIVFMGNDSACKTMGVGTIQLKNHDGLIQVLTDVR 68
Query: 61 HIPNLRKNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLGTTITGDVA 120
+IP+L+KNLISLGVLE G I + +G +KVV G L VM+GTR NLY L G+TI G +
Sbjct: 69 YIPSLKKNLISLGVLESKGLTITLRDGLLKVVAGILTVMKGTRRNNLYYLNGSTIIGSTS 128
Query: 121 VGISGRDPTASTRLWHMRLGHMSEKGLS 148
+ + +TRLWHMRLGH EK L
Sbjct: 129 TASTKDADSEATRLWHMRLGHAGEKALQ 156
>KYP36890.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 230
Score = 172 bits (435), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 110/150 (73%)
Query: 1 MLDSGASHHMCPNREWFTTYRSIDGGTVILGDDSICKTVGLGTIRIKMHDGVVRTLTDVR 60
+LDSG S+HMCPNR WF TY GG V +G+D CKT+G+GTI+IKMHDGV++TLT+VR
Sbjct: 2 VLDSGCSYHMCPNRSWFLTYEKKYGGDVFMGNDMECKTIGIGTIQIKMHDGVIKTLTEVR 61
Query: 61 HIPNLRKNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRGTRYGNLYKLLGTTITGDVA 120
H+PNL+KNLI +G L+ G K +E G +++ KGS +V+RG + GNLY L G+T +
Sbjct: 62 HVPNLKKNLILVGFLDTKGFKCNVEGGVMEISKGSTIVIRGIKKGNLYMLQGSTNLISES 121
Query: 121 VGISGRDPTASTRLWHMRLGHMSEKGLSLM 150
V ++ + T LWHMRLGHMSE+G+ ++
Sbjct: 122 VSVADKHTPDLTHLWHMRLGHMSERGMMVL 151
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 184 bits (466), Expect = 6e-51, Method: Composition-based stats.
Identities = 84/155 (54%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 1 MLDSGASHHMCPNREWFTTYRSIDGGTVILGDDSICKTVGLGTIRIKMHDGVVRTLTDVR 60
+LD+ ++HMCPNR+WF TY ++ GGTV++GDD+ C+ G+GT++IKM DG +RTL DVR
Sbjct: 210 ILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVR 269
Query: 61 HIPNLRKNLISLGVLERNGCKIIIENGSIKVVKGSLVVMRG-TRYGNLYKLLGTTITGDV 119
HIPNL+++LISL L+R G K +G +KV KGSLVVM+ +Y NLY L GTTI G+V
Sbjct: 270 HIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNV 329
Query: 120 AVGISGRDPTASTRLWHMRLGHMSEKGLSLMCGKG 154
A + +T LWHMRLGHMSE GL+ + +G
Sbjct: 330 AAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRG 364