BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2340.1
(408 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010260314.1 PREDICTED: reticulon-like protein B17 [Nelumbo nu... 399 e-134
XP_010272355.1 PREDICTED: reticulon-like protein B17 isoform X2 ... 397 e-133
XP_010272354.1 PREDICTED: reticulon-like protein B17 isoform X1 ... 392 e-131
>XP_010260314.1 PREDICTED: reticulon-like protein B17 [Nelumbo nucifera]
Length = 434
Score = 399 bits (1026), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/422 (54%), Positives = 294/422 (69%), Gaps = 31/422 (7%)
Query: 1 MNSTPSSHRSSSSLRLNSSSRISRNNKEDDQNNSSP--------------LSLQTSNLVP 46
M+STP S RS L + S+SR++R + P S + +P
Sbjct: 5 MDSTPPSRRSEPRLHIKSASRLARLEDFGAEPEDIPHFDAIPSSPNGSPSPSHPSRQALP 64
Query: 47 LKELLLLSPSPLRKSRTHLPEKTESLEEPIDLMGSRSRRCKSRGSPMGGLLSCGSPRNSR 106
L+ELLL SPSPLR+S+T L EK E EEPID +GSR RRCKS+ + M LLSC SPRNSR
Sbjct: 65 LQELLL-SPSPLRRSKTRLVEKAEIAEEPIDHLGSR-RRCKSKATSMS-LLSCPSPRNSR 121
Query: 107 RTRRRFDQEIREEREFGLGEDNGKTKKRRQSNRFRKEKLSLVLSTTSLPSPKTDIEIDDQ 166
RTRRR + EIRE+ GLG++ GK +KR+ S R RKEK SL S+PSPKT + +D
Sbjct: 122 RTRRRLEHEIRED--MGLGDEIGKARKRK-STRSRKEKPSLA---PSVPSPKTKGD-EDN 174
Query: 167 NRLNHIWQLLIDLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQLGLLFLAA 226
+ ++ I Q + DLIMWKDV+KS WFG GSL FLSSCF + FS+ SA+SQLGLLFL A
Sbjct: 175 SSIDRIGQFISDLIMWKDVAKSSLWFGFGSLGFLSSCFTKGLNFSIFSAVSQLGLLFLGA 234
Query: 227 TFFHNSFSKRQESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRKIFSGKPSMTLKVAP 286
+FF NS S+R + EQ +F L+EDDI+R A ++LP ANL+ R++FSG+PSMTLKVAP
Sbjct: 235 SFFFNSVSQRDK--EQKEFMLREDDIVRAARVMLPAANLLIAKTRQLFSGQPSMTLKVAP 292
Query: 287 ILLVGAEYGDSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYIRDWLVEAWGASSHK 346
LL GAEYG +TLWRLC TGFFV+FTVPK+YS Y E + KQV+Y+ W+ E W A SHK
Sbjct: 293 FLLFGAEYGHLMTLWRLCATGFFVTFTVPKLYSCYHESINKQVKYLSSWMKETWEACSHK 352
Query: 347 KIVAASAVTVFWNLSSIKARIFSAFISVVILRYYRQQVAEQEVIEVE----QQQHQALVL 402
KIVAASA T+FWNLSS+K RIF+AFIS+V+LR++R Q ++ EV EVE QQ Q +++
Sbjct: 353 KIVAASAATLFWNLSSLKTRIFTAFISLVLLRFHR-QYSQIEVEEVEWENQHQQQQDMMV 411
Query: 403 VT 404
V
Sbjct: 412 VA 413
>XP_010272355.1 PREDICTED: reticulon-like protein B17 isoform X2 [Nelumbo nucifera]
Length = 446
Score = 397 bits (1020), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/419 (53%), Positives = 286/419 (68%), Gaps = 32/419 (7%)
Query: 1 MNSTPSSHRSSSSLRLNSSSRISRNNKEDDQNNSSPLSLQTSNLVPLKELLLLSPSPL-- 58
M+STP S RS LR+ S+SR +R ED ++ + + ++P + LSPS L
Sbjct: 6 MDSTPPSRRSEPRLRIKSASRFART--EDFGADAEDIPHFSVEVIPSSPNVTLSPSLLSR 63
Query: 59 -------------------RKSRTHLPEKTESLEEPIDLMGSRSRRCKSRGSPMGGLLSC 99
R+S++ L E+TE EEPID +GSR RRCKSR S M +L C
Sbjct: 64 QGVPLQELLLLSPSSHSPLRRSKSRLNERTEMAEEPIDQLGSR-RRCKSRASSMA-VLGC 121
Query: 100 GSPRNSRRTRRRFDQEIREEREFGLGEDNGKTKKRRQSNRFRKEKLSLVLSTTSLPSPKT 159
SPRN RRTRRR +QEIREE++ GLG + GK + RR+S R KE S+V S+ SPKT
Sbjct: 122 ASPRNGRRTRRRLEQEIREEKDVGLGVEIGKAR-RRKSTRSCKENPSIV---PSVRSPKT 177
Query: 160 DIEIDDQNRLNHIWQLLIDLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQL 219
DD L+HIWQL+ D +MWKDV+KS WFG GSL FLSSCF R FS+ISA+SQL
Sbjct: 178 GD--DDPCNLDHIWQLISDQVMWKDVAKSSLWFGFGSLCFLSSCFTRGLNFSIISAVSQL 235
Query: 220 GLLFLAATFFHNSFSKRQESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRKIFSGKPS 279
GLLFL A+FF NS S+ E ++ +F LKEDDI+R+A ++LP ANLV +++FSG+PS
Sbjct: 236 GLLFLGASFFFNSISQSHEDHKKQEFKLKEDDILRVARVMLPAANLVIAKTKELFSGEPS 295
Query: 280 MTLKVAPILLVGAEYGDSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYIRDWLVEA 339
MTLK APILL GAEYG ITLWRLC TGFFVSFT PK+YS +SE++KKQVE R W+ E
Sbjct: 296 MTLKAAPILLFGAEYGHLITLWRLCATGFFVSFTAPKLYSCHSEKIKKQVENWRSWMREK 355
Query: 340 WGASSHKKIVAASAVTVFWNLSSIKARIFSAFISVVILRYYRQQVAEQEVIEVEQQQHQ 398
W A S KKIVAASA TV WNLSS+K R+F+ FI +VILR++RQ ++ EV E+E ++HQ
Sbjct: 356 WVACSRKKIVAASAATVLWNLSSLKTRMFAVFILLVILRFHRQH-SQVEVKELEGEKHQ 413
>XP_010272354.1 PREDICTED: reticulon-like protein B17 isoform X1 [Nelumbo nucifera]
Length = 448
Score = 392 bits (1007), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/421 (53%), Positives = 286/421 (67%), Gaps = 34/421 (8%)
Query: 1 MNSTPSSHRSSSSLRLNSSSRISRNNKEDDQNNSSPLSLQTSNLVPLKELLLLSPSPL-- 58
M+STP S RS LR+ S+SR +R ED ++ + + ++P + LSPS L
Sbjct: 6 MDSTPPSRRSEPRLRIKSASRFART--EDFGADAEDIPHFSVEVIPSSPNVTLSPSLLSR 63
Query: 59 -------------------RKSRTHLPEKTESLEEPIDLMGSRSRRCKSRGSPMGGLLSC 99
R+S++ L E+TE EEPID +GSR RRCKSR S M +L C
Sbjct: 64 QGVPLQELLLLSPSSHSPLRRSKSRLNERTEMAEEPIDQLGSR-RRCKSRASSMA-VLGC 121
Query: 100 GSPRNSRRTRRRFDQEIREEREFGLGEDNGKTKKRRQSNRFRKEKLSLVLSTTSLPSPKT 159
SPRN RRTRRR +QEIREE++ GLG + GK + RR+S R KE S+V S+ SPKT
Sbjct: 122 ASPRNGRRTRRRLEQEIREEKDVGLGVEIGKAR-RRKSTRSCKENPSIV---PSVRSPKT 177
Query: 160 DIEIDDQNRLNHIWQLLIDLIMWKDVSKSIFWFGLGSLFFLSSCFARSFRFSVISAISQL 219
DD L+HIWQL+ D +MWKDV+KS WFG GSL FLSSCF R FS+ISA+SQL
Sbjct: 178 GD--DDPCNLDHIWQLISDQVMWKDVAKSSLWFGFGSLCFLSSCFTRGLNFSIISAVSQL 235
Query: 220 GLLFLAATFFHNSFSKR--QESDEQLDFNLKEDDIIRLASLILPFANLVTNNMRKIFSGK 277
GLLFL A+FF NS S+ E ++ +F LKEDDI+R+A ++LP ANLV +++FSG+
Sbjct: 236 GLLFLGASFFFNSISQSYSHEDHKKQEFKLKEDDILRVARVMLPAANLVIAKTKELFSGE 295
Query: 278 PSMTLKVAPILLVGAEYGDSITLWRLCVTGFFVSFTVPKIYSSYSEQLKKQVEYIRDWLV 337
PSMTLK APILL GAEYG ITLWRLC TGFFVSFT PK+YS +SE++KKQVE R W+
Sbjct: 296 PSMTLKAAPILLFGAEYGHLITLWRLCATGFFVSFTAPKLYSCHSEKIKKQVENWRSWMR 355
Query: 338 EAWGASSHKKIVAASAVTVFWNLSSIKARIFSAFISVVILRYYRQQVAEQEVIEVEQQQH 397
E W A S KKIVAASA TV WNLSS+K R+F+ FI +VILR++RQ ++ EV E+E ++H
Sbjct: 356 EKWVACSRKKIVAASAATVLWNLSSLKTRMFAVFILLVILRFHRQH-SQVEVKELEGEKH 414
Query: 398 Q 398
Q
Sbjct: 415 Q 415