BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000051.1_g2390.1
(799 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP69326.1 Retrovirus-related Pol polyprotein from transposon TN... 376 e-120
KYP68590.1 Retrovirus-related Pol polyprotein from transposon TN... 376 e-118
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN... 378 e-112
>KYP69326.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 389
Score = 376 bits (965), Expect = e-120, Method: Compositional matrix adjust.
Identities = 187/287 (65%), Positives = 227/287 (79%), Gaps = 7/287 (2%)
Query: 469 DPMCNNKRYLMNLLEFLL--DSTIRFSKGVAGTSLQEIKNLKDQLAGEFAMKDLGEARQF 526
D C KRY + + LL D + VAG + EI++LK +L+ EF MKDLG A++
Sbjct: 52 DHCCYFKRYKSSYIILLLYVDDML-----VAGLDMDEIRSLKQRLSREFDMKDLGPAKKI 106
Query: 527 LGMRISRDKSKGTLMLSQAEYIERVLKRFNMEGAKPVGMPLGSHFKLSKLQSPVTDVEKE 586
LGM+I+RDK +G L LSQAEYI RVL+RFNM AKPV PL SHF+LSK QSP T+ E+
Sbjct: 107 LGMQITRDKQRGILQLSQAEYINRVLQRFNMGDAKPVSTPLASHFRLSKDQSPQTEEERY 166
Query: 587 FMAGVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYSSNPGKQHWEAVKWILRYLRGSTNV 646
FMA VPYASAIGSLMYAMVCTRPDI HAVGVVSR+ SNPGK HWEAVKWILRYLRG+T
Sbjct: 167 FMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLRGTTER 226
Query: 647 PLCYGRRNSVLNGYVDADFAGDLDKRRSTTGYVYTLGSTAVSWNSRLQKLVTLSTTEAEY 706
L +G+ + GYVDAD+ G++D RRSTTGY++T+G+TAVSW S++QK+V LSTTEAEY
Sbjct: 227 CLHFGKGKIKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMSQVQKIVALSTTEAEY 286
Query: 707 VAVTEASKEMIWLKGLLAELGHEKKNSILYSDSQSAIHLAKNSAYHA 753
VAVTEASKE+IWL+GLL ELG ++ S+L+SDSQSAIHLAKNSA+H+
Sbjct: 287 VAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAFHS 333
>KYP68590.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 523
Score = 376 bits (965), Expect = e-118, Method: Compositional matrix adjust.
Identities = 187/287 (65%), Positives = 227/287 (79%), Gaps = 7/287 (2%)
Query: 469 DPMCNNKRYLMNLLEFLL--DSTIRFSKGVAGTSLQEIKNLKDQLAGEFAMKDLGEARQF 526
D C KRY + + LL D + VAG + EI++LK +L+ EF MKDLG A++
Sbjct: 186 DHCCYFKRYKSSYIILLLYVDDML-----VAGLDMDEIRSLKQRLSREFDMKDLGPAKKI 240
Query: 527 LGMRISRDKSKGTLMLSQAEYIERVLKRFNMEGAKPVGMPLGSHFKLSKLQSPVTDVEKE 586
LGM+I+RDK +G L LSQAEYI RVL+RFNM AKPV PL SHF+LSK QSP T+ E+
Sbjct: 241 LGMQITRDKQRGILQLSQAEYINRVLQRFNMGDAKPVSTPLASHFRLSKDQSPQTEEERY 300
Query: 587 FMAGVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYSSNPGKQHWEAVKWILRYLRGSTNV 646
FMA VPYASAIGSLMYAMVCTRPDI HAVGVVSR+ SNPGK HWEAVKWILRYLRG+T
Sbjct: 301 FMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLRGTTER 360
Query: 647 PLCYGRRNSVLNGYVDADFAGDLDKRRSTTGYVYTLGSTAVSWNSRLQKLVTLSTTEAEY 706
L +G+ + GYVDAD+ G++D RRSTTGY++T+G+TAVSW S++QK+V LSTTEAEY
Sbjct: 361 CLHFGKGKIKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMSQVQKIVALSTTEAEY 420
Query: 707 VAVTEASKEMIWLKGLLAELGHEKKNSILYSDSQSAIHLAKNSAYHA 753
VAVTEASKE+IWL+GLL ELG ++ S+L+SDSQSAIHLAKNSA+H+
Sbjct: 421 VAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAFHS 467
>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 378 bits (971), Expect = e-112, Method: Compositional matrix adjust.
Identities = 188/287 (65%), Positives = 226/287 (78%), Gaps = 7/287 (2%)
Query: 469 DPMCNNKRYLMNLLEFLL--DSTIRFSKGVAGTSLQEIKNLKDQLAGEFAMKDLGEARQF 526
D C KRY + + LL D + VAG+++ EI+NLK QL+ EF MKDLG A++
Sbjct: 932 DHCCFFKRYNSSYIILLLYVDDML-----VAGSNMIEIRNLKKQLSKEFDMKDLGPAKKI 986
Query: 527 LGMRISRDKSKGTLMLSQAEYIERVLKRFNMEGAKPVGMPLGSHFKLSKLQSPVTDVEKE 586
LGM+I+RDK KGTL LSQAEYI RVL+RFNM AKPV PL SHF+LS QSP T+ EKE
Sbjct: 987 LGMQITRDKQKGTLQLSQAEYINRVLQRFNMSNAKPVSTPLASHFRLSTDQSPKTEEEKE 1046
Query: 587 FMAGVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYSSNPGKQHWEAVKWILRYLRGSTNV 646
MA PYASAIGSLMYAMVCTRPDI +AVGVVSR+ SNPGK HWEAVKWILRYLR +
Sbjct: 1047 LMAKTPYASAIGSLMYAMVCTRPDIGYAVGVVSRFMSNPGKAHWEAVKWILRYLRATKEK 1106
Query: 647 PLCYGRRNSVLNGYVDADFAGDLDKRRSTTGYVYTLGSTAVSWNSRLQKLVTLSTTEAEY 706
LC+ + + GYVDADFAG++D RRSTTGY++T+G+TAVSW S++QK+V LSTTEAEY
Sbjct: 1107 CLCFSKGELKVQGYVDADFAGEIDHRRSTTGYIFTVGTTAVSWMSQIQKIVALSTTEAEY 1166
Query: 707 VAVTEASKEMIWLKGLLAELGHEKKNSILYSDSQSAIHLAKNSAYHA 753
VAVTEASKE+IWL+GLL ELG ++ S+L+SDSQSAIHLAKNS +H+
Sbjct: 1167 VAVTEASKELIWLQGLLTELGFIQERSVLHSDSQSAIHLAKNSTFHS 1213