BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0070.1
(290 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017181712.1 PREDICTED: uncharacterized mitochondrial protein ... 285 7e-91
AFP55537.1 retrotransposon polyprotein [Rosa rugosa] 281 6e-83
XP_016649007.1 PREDICTED: uncharacterized mitochondrial protein ... 263 3e-82
>XP_017181712.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 432
Score = 285 bits (728), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 143/283 (50%), Positives = 193/283 (68%), Gaps = 5/283 (1%)
Query: 1 MNVLGCKWVFRLKQKSDGSIERYKDRLVAKGFHQQEGVDYAETFSPVVKSNTIRTVV--- 57
MNVL KWVF++K+K+DG++ER+K RLVA GFHQ+ GVDY ETFSPVVK +TIR V+
Sbjct: 1 MNVLPNKWVFKIKRKADGTVERHKARLVANGFHQKAGVDYTETFSPVVKHSTIRFVLSLA 60
Query: 58 VTRSWHIKQLDVSNAFLHDTLDEAVFMVQASDFIQSGKESYVCYLYKALYGLKQAPRAWS 117
V++ W ++QLDVSNAFLH L+E V+M Q S FI ++VC L +++YGLKQAPRAW
Sbjct: 61 VSKKWPVRQLDVSNAFLHGYLNEHVYMRQPSGFIDKQFPNHVCQLQRSIYGLKQAPRAWF 120
Query: 118 TKFATFLYSYGFHKSKKDHSMFVLHSSTSTMVLLLYVDDIILTSSSVTQINCLINDLSVA 177
+F+ FL GF +S D+S+FV + ++LL+YVDDI+LT +S Q++ LI L
Sbjct: 121 QRFSDFLLQLGFEESTCDYSLFVFNQRGVYLILLIYVDDILLTGNSPRQMDHLIKKLGSL 180
Query: 178 YKMKDLEPLAYFLGIEVTHNQQQRYMMLTQNKYALQLLQKAELLNSKPSKLPVSNGQRIS 237
+ MKDL PL+YFLGIEV +N +M L Q+KYAL LL + + ++KP PV +GQ++S
Sbjct: 181 FSMKDLGPLSYFLGIEVKYNGD--FMHLCQSKYALDLLTRTKFTDAKPISTPVPSGQKLS 238
Query: 238 LTDGDELPNPTEYRSLVGALQYLMHLNSSRPLICRQLCSTVHA 280
GD NP YRS+VGALQYL Q+C +H+
Sbjct: 239 AYAGDLFANPEMYRSVVGALQYLTITXPDLSYXVNQVCQFMHS 281
>AFP55537.1 retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 281 bits (718), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 202/289 (69%), Gaps = 11/289 (3%)
Query: 1 MNVLGCKWVFRLKQKSDGSIERYKDRLVAKGFHQQEGVDYAETFSPVVKSNTIRTVV--- 57
MN+L KWVFR+K++SDGS+ERYK RLVA GFHQQEG+DY ETFSPVVK +TIR V+
Sbjct: 912 MNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTETFSPVVKHSTIRLVLALA 971
Query: 58 VTRSWHIKQLDVSNAFLHDTLDEAVFMVQASDFIQSGKESYVCYLYKALYGLKQAPRAWS 117
V+ W I+QLDV N FLH L+E ++M Q F+ +VC L ++LYGLKQAPRAW
Sbjct: 972 VSHRWPIRQLDVQNVFLHGYLNEDIYMKQHVGFVDPKFPQHVCKLRRSLYGLKQAPRAWF 1031
Query: 118 TKFATFLYSYGFHKSKKDHSMFVLHSSTSTMVLLLYVDDIILTSSSVTQINCLINDLSVA 177
F+ +L GF +S+ D+SMF ++ ++LL+YVDDI++T ++ + I+ LI++L+
Sbjct: 1032 RCFSDYLEELGFLESRADYSMFTFNNRGIYIILLIYVDDILITGNNSSHISHLIHNLNSL 1091
Query: 178 YKMKDLEPLAYFLGIEVTHNQQQRYMMLTQNKYALQLLQKAELLNSKPSKLPVSNGQRIS 237
+ MKDL + YFLGIE +N ++ LTQ+KY + LL+K +L +S+P PV +G+++S
Sbjct: 1092 FSMKDLGSVHYFLGIETVYNGD--HLHLTQHKYIVDLLKKTKLHDSRPYPTPVLSGKKLS 1149
Query: 238 LTDGDELPNPTEYRSLVGALQYLMHLNSSRPLIC---RQLCSTVHAQAN 283
+ DG +L +P+EYRS+VGALQY L +RP IC Q+C +H+ N
Sbjct: 1150 VYDGVKLEDPSEYRSIVGALQY---LTLTRPDICYAVNQVCQFMHSPTN 1195
>XP_016649007.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Prunus mume]
Length = 431
Score = 263 bits (671), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 180/282 (63%), Gaps = 6/282 (2%)
Query: 2 NVLGCKWVFRLKQKSDGSIERYKDRLVAKGFHQQEGVDYAETFSPVVKSNTIRTVVVTRS 61
N++GCKWV+R+K+ +DGSI R+K RLVAKGF Q+EG+DY ETFSPVVK T+R ++ +
Sbjct: 24 NLVGCKWVYRIKKNADGSIARHKARLVAKGFSQEEGIDYYETFSPVVKPTTVRLILALAA 83
Query: 62 ---WHIKQLDVSNAFLHDTLDEAVFMVQASDFIQSGKES-YVCYLYKALYGLKQAPRAWS 117
W ++QLDV AFLH L E V+M Q F S +VC L K+LYGLKQAPRAW+
Sbjct: 84 QFQWSLRQLDVKKAFLHGVLQEEVYMTQPQGFASKHHPSDFVCRLKKSLYGLKQAPRAWN 143
Query: 118 TKFATFLYSYGFHKSKKDHSMFVLHSSTSTMVLLLYVDDIILTSSSVTQINCLINDLSVA 177
+F +FL S GF S D S+F+ HSS T+VLLLYVDDIILT S+ + I +I L+
Sbjct: 144 ERFTSFLPSLGFQASNADPSLFIQHSSLGTVVLLLYVDDIILTGSNSSLITSVIGALTQE 203
Query: 178 YKMKDLEPLAYFLGIEVTHNQQQRYMMLTQNKYALQLLQKAELLNSKPSKLPVSNGQRIS 237
+ MKDL L YFLG+++++ Q + ++Q KY +LL + +L +SKP P R+
Sbjct: 204 FDMKDLGQLTYFLGLQISY--QSAGLFVSQTKYIKELLDRVDLQDSKPCPTPCLPYHRLL 261
Query: 238 LTDGDELPNPTEYRSLVGALQYLMHLNSSRPLICRQLCSTVH 279
DG +P +YRS+VGALQYL Q C +H
Sbjct: 262 KDDGKPYSHPEQYRSIVGALQYLTFTRPDIAFSVNQACQFMH 303