BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0160.1
(138 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP79141.1 Retrovirus-related Pol polyprotein from transposon TN... 106 3e-24
KYP71150.1 Retrovirus-related Pol polyprotein from transposon TN... 106 3e-24
KYP49211.1 Retrovirus-related Pol polyprotein from transposon TN... 104 2e-23
>KYP79141.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 990
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Query: 36 MSSRFDEYVVSNDNDDSDEDFASFAFFADCNPITFKEAEKNVVQISTTDDEIHSIEKNDN 95
+ +R ++YVV NDND SDE+ +FA FADC P+TF+EA N D+EIH+IEKN
Sbjct: 452 LPARLEDYVVGNDNDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQT 511
Query: 96 SGLNYLPTGNKPIGLKWSFKNKYKSDDGQVD----KLIVKEYDQEP 137
L LP KPIG+KW +K KYKS G++D +L+VK Y Q+P
Sbjct: 512 WELTDLPADKKPIGVKWVYKTKYKS-SGEIDRLKARLVVKGYKQKP 556
>KYP71150.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1228
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Query: 36 MSSRFDEYVVSNDNDDSDEDFASFAFFADCNPITFKEAEKNVVQISTTDDEIHSIEKNDN 95
+ +R ++YVV NDND SDE+ +FA FADC P+TF+EA N D+EIH+IEKN
Sbjct: 690 LPARLEDYVVGNDNDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQT 749
Query: 96 SGLNYLPTGNKPIGLKWSFKNKYKSDDGQVD----KLIVKEYDQEP 137
L LP KPIG+KW +K KYKS G++D +L+VK Y Q+P
Sbjct: 750 WELTDLPADKKPIGVKWVYKTKYKS-SGEIDRLKARLVVKGYKQKP 794
>KYP49211.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 999
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 36 MSSRFDEYVVSNDNDDSDEDFASFAFFADCNPITFKEAEKNVVQISTTDDEIHSIEKNDN 95
+ +R ++YVV NDND SDE+ +FA FADC P+TF+EA N D+EIH+IEKN
Sbjct: 500 LPARLEDYVVGNDNDPSDEEIINFALFADCKPVTFEEASNNQHLRKAMDEEIHAIEKNQT 559
Query: 96 SGLNYLPTGNKPIGLKWSFKNKYKSDDGQVD----KLIVKEYDQEP 137
L LP +PIG+KW +K KYKS G++D +L+ K Y Q+P
Sbjct: 560 WELTDLPADKRPIGVKWVYKTKYKS-SGEIDRLKARLVAKGYKQKP 604