BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0180.1
(116 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004301710.1 PREDICTED: uncharacterized protein LOC101290873 [... 55 4e-07
XP_007039556.1 Uncharacterized protein TCM_015759 [Theobroma cac... 53 5e-06
ABA97049.1 retrotransposon protein, putative, Ty3-gypsy subclass... 53 7e-06
>XP_004301710.1 PREDICTED: uncharacterized protein LOC101290873 [Fragaria vesca
subsp. vesca]
Length = 169
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 2 ALADHIRGQNSEECECLAILRATQWMKQLRIKRVLIQSDNQNLINYLTSKQTTIHWQSEK 61
LA +R + E E LAIL + +K V +QSD+Q++I+ L S T +W++
Sbjct: 41 GLASLVRASSVEAVEALAILAGVNLAVDMNMKAVQVQSDSQSVISDLNSIATCNNWRTNL 100
Query: 62 YLDEIGNLKKQFDYIAFRHIARENNKEADKLAKWGRMNSKKKIWASITWEELARL 116
++EI + FD + +R I RE N A A+ G+ IW+ L +
Sbjct: 101 IVEEIKWKSRYFDRVHWRWIPREANSAAHTAAQLGKQVLGLCIWSETPPPSLTMV 155
>XP_007039556.1 Uncharacterized protein TCM_015759 [Theobroma cacao] EOY24057.1
Uncharacterized protein TCM_015759 [Theobroma cacao]
Length = 275
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 3 LADHIRGQNSEECECLA------ILRATQWMKQLRIKRVLIQSDNQNLINYLTSKQTTIH 56
+ HI +S E E LA I A+QW R+LI+SD+ N++ ++ + T
Sbjct: 169 FSKHIDTTDSNEAEILAVREAFLIFMASQWKDN---HRLLIESDSANVVKWINNANTA-P 224
Query: 57 WQSEKYLDEIGNLKKQFDYIAFRHIARENNKEADKLAKWG 96
W+ K++ +IG++KK+ RH+ RE N+ A LAK G
Sbjct: 225 WRKRKWVLQIGSMKKELTGWEIRHVLREANQRAGDLAKEG 264
>ABA97049.1 retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1399
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 19 AILRATQWMKQLRIKRVLIQSDNQNLINYLTSKQTTIHWQSEKYLDEIGNLKKQFDYIAF 78
A+L + L I+R+ ++ D+Q ++N + + + +H Y E+G L+ +FD +
Sbjct: 1263 ALLHGLRIAISLGIRRLTVRGDSQLVVNQVMKEWSCLHDNMTAYRQEVGKLEDKFDGLEL 1322
Query: 79 RHIARENNKEADKLAKWG 96
H+ R NN+ AD+LA +G
Sbjct: 1323 THVLRHNNEAADRLANFG 1340