BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000054.1_g0300.1
         (89 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002443133.1 hypothetical protein SORBIDRAFT_08g010840 [Sorghu...   108   8e-26
XP_002449547.1 hypothetical protein SORBIDRAFT_05g018930 [Sorghu...   107   2e-25
XP_015624442.1 PREDICTED: uncharacterized mitochondrial protein ...   102   4e-25

>XP_002443133.1 hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
          Length = 725

 Score =  108 bits (270), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 59/81 (72%)

Query: 1   MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
           +TRPDLAYAV     FM  PR +H+ L+K+ LRYVKGT+  G+ I  G V KL  YSD D
Sbjct: 607 LTRPDLAYAVQQVCLFMHDPREAHLALIKRILRYVKGTLSAGLHIGTGPVDKLIAYSDAD 666

Query: 61  WAGCPDSRRSTNGFCVVLGQS 81
           WAGCPDSRRST+GFCV LG S
Sbjct: 667 WAGCPDSRRSTSGFCVFLGDS 687


>XP_002449547.1 hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
          Length = 619

 Score =  107 bits (268), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/81 (61%), Positives = 58/81 (71%)

Query: 1   MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
           +TRPDLAYAV     FM  PR +H+ L+K+ LRYVKGT+  G+ I  G V KL  YSD D
Sbjct: 406 LTRPDLAYAVQQVCLFMHDPREAHLALIKRILRYVKGTLSAGLHIGTGPVDKLIAYSDAD 465

Query: 61  WAGCPDSRRSTNGFCVVLGQS 81
           WA CPDSRRST+GFCV LG S
Sbjct: 466 WARCPDSRRSTSGFCVFLGDS 486


>XP_015624442.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Oryza sativa Japonica Group]
          Length = 257

 Score =  102 bits (255), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 56/79 (70%)

Query: 1   MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
           +TRPDLAYAV     FM  PR  H+ L+K+ LRYVKG++  G+ I  G +  L  YSD D
Sbjct: 43  LTRPDLAYAVQQVCLFMHDPREPHLALVKRILRYVKGSLSTGLHIGSGPIQSLTAYSDAD 102

Query: 61  WAGCPDSRRSTNGFCVVLG 79
           WAGCPDSRRST+G+CV LG
Sbjct: 103 WAGCPDSRRSTSGYCVFLG 121


Top