BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0300.1
(89 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002443133.1 hypothetical protein SORBIDRAFT_08g010840 [Sorghu... 108 8e-26
XP_002449547.1 hypothetical protein SORBIDRAFT_05g018930 [Sorghu... 107 2e-25
XP_015624442.1 PREDICTED: uncharacterized mitochondrial protein ... 102 4e-25
>XP_002443133.1 hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
Length = 725
Score = 108 bits (270), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 59/81 (72%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TRPDLAYAV FM PR +H+ L+K+ LRYVKGT+ G+ I G V KL YSD D
Sbjct: 607 LTRPDLAYAVQQVCLFMHDPREAHLALIKRILRYVKGTLSAGLHIGTGPVDKLIAYSDAD 666
Query: 61 WAGCPDSRRSTNGFCVVLGQS 81
WAGCPDSRRST+GFCV LG S
Sbjct: 667 WAGCPDSRRSTSGFCVFLGDS 687
>XP_002449547.1 hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
Length = 619
Score = 107 bits (268), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 58/81 (71%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TRPDLAYAV FM PR +H+ L+K+ LRYVKGT+ G+ I G V KL YSD D
Sbjct: 406 LTRPDLAYAVQQVCLFMHDPREAHLALIKRILRYVKGTLSAGLHIGTGPVDKLIAYSDAD 465
Query: 61 WAGCPDSRRSTNGFCVVLGQS 81
WA CPDSRRST+GFCV LG S
Sbjct: 466 WARCPDSRRSTSGFCVFLGDS 486
>XP_015624442.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Oryza sativa Japonica Group]
Length = 257
Score = 102 bits (255), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%)
Query: 1 MTRPDLAYAVNYDAQFMQKPRSSHVQLMKKSLRYVKGTIDCGITITPGDVSKLRGYSDLD 60
+TRPDLAYAV FM PR H+ L+K+ LRYVKG++ G+ I G + L YSD D
Sbjct: 43 LTRPDLAYAVQQVCLFMHDPREPHLALVKRILRYVKGSLSTGLHIGSGPIQSLTAYSDAD 102
Query: 61 WAGCPDSRRSTNGFCVVLG 79
WAGCPDSRRST+G+CV LG
Sbjct: 103 WAGCPDSRRSTSGYCVFLG 121