BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0310.1
(335 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAE05127.3 OSJNBa0079F16.14 [Oryza sativa Japonica Group] 226 1e-68
XP_017182116.1 PREDICTED: uncharacterized mitochondrial protein ... 224 4e-67
ABA93844.2 retrotransposon protein, putative, unclassified [Oryz... 237 5e-67
>CAE05127.3 OSJNBa0079F16.14 [Oryza sativa Japonica Group]
Length = 322
Score = 226 bits (575), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 142/207 (68%), Gaps = 1/207 (0%)
Query: 129 YSETFSHVVKAATIRTVLNVVVSNGRKIHQLDVSNAFLHGILHENVYMTQPQGFIDLKYP 188
+ E FS V+K AT+RTVL++ VS +HQLDV NAFLH L E VY TQP GF+D P
Sbjct: 104 FDEIFSPVIKPATVRTVLSLAVSRDWPVHQLDVKNAFLHRTLQETVYCTQPAGFVDPTKP 163
Query: 189 SYVCHLHKSFYGLKQAPKAWFQRFGSFLLTLGFKRSAHDHSMFVQQTESATMVLLLYVDD 248
VC L+KS YGLKQAP+AW+ RF SFLLTLGF + D S+F+ + S T+ LLLYVDD
Sbjct: 164 DLVCRLNKSLYGLKQAPRAWYSRFASFLLTLGFVEAKSDTSLFIYRRGSDTVYLLLYVDD 223
Query: 249 IILTGSCDSLMTALVATLSKEFAMKMLGHLHFFLGIEVTRAESSVLFLTQKKYALSLLEK 308
I+LT S D+L+ + L EF+MK LG LH FLGI ++R +SS L L+Q++Y L +LE+
Sbjct: 224 IVLTASSDALLRWTIRALQSEFSMKDLGSLHHFLGISISR-QSSGLHLSQRQYCLEVLER 282
Query: 309 AALPDSKPSCTPVSGRNRLSKSDGTIV 335
A + D KP TPV +LS +DG V
Sbjct: 283 AGMTDCKPCATPVDTNAKLSAADGAPV 309
>XP_017182116.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 370
Score = 224 bits (570), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 140/205 (68%), Gaps = 1/205 (0%)
Query: 128 CYSETFSHVVKAATIRTVLNVVVSNGRKIHQLDVSNAFLHGILHENVYMTQPQGFIDLKY 187
Y ETFS VVK TIR VL + G + QLDV NAFLHGIL E VYM+QP GFID Y
Sbjct: 32 AYGETFSPVVKPTTIRLVLALAAHYGWSLRQLDVKNAFLHGILKEEVYMSQPPGFIDFHY 91
Query: 188 PSYVCHLHKSFYGLKQAPKAWFQRFGSFLLTLGFKRSAHDHSMFVQQTESATMVLLLYVD 247
P YVC LHKS Y LKQAP+AW ++F +FL +LGF + D S+FV+QT S+ ++LLLYVD
Sbjct: 92 PDYVCKLHKSLYRLKQAPRAWNEKFTTFLPSLGFISTYADSSLFVKQTGSSIVILLLYVD 151
Query: 248 DIILTGSCDSLMTALVATLSKEFAMKMLGHLHFFLGIEVTRAESSVLFLTQKKYALSLLE 307
DII+TG+ S++ ++ L+KEF +K LG LH+FLGI+V ++S LFL+Q KY LL
Sbjct: 152 DIIITGNTSSVINEVIGALTKEFDLKDLGQLHYFLGIQVI-SQSDGLFLSQAKYLRDLLA 210
Query: 308 KAALPDSKPSCTPVSGRNRLSKSDG 332
K + DSKP TP N L DG
Sbjct: 211 KTNMEDSKPCATPCLPYNSLVLDDG 235
>ABA93844.2 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1099
Score = 237 bits (604), Expect = 5e-67, Method: Composition-based stats.
Identities = 124/247 (50%), Positives = 159/247 (64%), Gaps = 11/247 (4%)
Query: 89 MKSSCPYTPQQNGRAEMRNRQITEMGNSLMFHGSPKCYWCYSETFSHVVKAATIRTVLNV 148
M+ SCPYT QNG+AE R I + + F ETFS VVK AT+RTVL++
Sbjct: 642 MQMSCPYTSPQNGKAERMLRSINNIRPGIDF----------DETFSPVVKPATVRTVLSL 691
Query: 149 VVSNGRKIHQLDVSNAFLHGILHENVYMTQPQGFIDLKYPSYVCHLHKSFYGLKQAPKAW 208
V+ +HQLDV NAFLHG L E VY TQP GF D P VC L+KS YGLKQAP+AW
Sbjct: 692 AVTRQWPVHQLDVKNAFLHGALQETVYCTQPSGFEDTTRPDMVCRLNKSLYGLKQAPRAW 751
Query: 209 FQRFGSFLLTLGFKRSAHDHSMFVQQTESATMVLLLYVDDIILTGSCDSLMTALVATLSK 268
+ RF S+LLTLGF ++ D S+F+ S + LLLYVDDI+LT S L+ + L
Sbjct: 752 YSRFASYLLTLGFTKAKSDTSLFIYHRGSDLVYLLLYVDDIVLTASSAGLLRWAIQALQA 811
Query: 269 EFAMKMLGHLHFFLGIEVTRAESSVLFLTQKKYALSLLEKAALPDSKPSCTPVSGRNRLS 328
EF+MK LG LH FLGI VT ++SS L L+Q++Y++ +LE+A + D KP TPV +LS
Sbjct: 812 EFSMKDLGTLHHFLGITVT-SDSSGLLLSQRQYSIEILERAGMSDCKPCSTPVDTNAKLS 870
Query: 329 KSDGTIV 335
+DG+ V
Sbjct: 871 STDGSPV 877