BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000054.1_g0350.1
(99 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016493622.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 9e-10
KYP42578.1 Pentatricopeptide repeat-containing protein At1g11290... 59 4e-08
XP_008237400.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 3e-07
>XP_016493622.1 PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Nicotiana tabacum]
Length = 246
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 7 GNESLVVLQRMLDTYNEPTSITFIYVLSACAHTGKATLLGACRTHGNIEIGAKAANRFIQ 66
G ++L +M+D+ P +TF+ VLSAC H G L ACR HGN+E+G A + ++
Sbjct: 116 GRDALSYFSKMVDSGLRPDDVTFLGVLSACCHAGLGALFFACRIHGNVEMGGNAVLKLLE 175
Query: 67 LECSNVA---LMASLQIFTQVQKDERIHYDMINDER 99
+ + L+A++ + +Q + R M+ DER
Sbjct: 176 FDPGDSGTYVLLANIYVEANMQHNARDIRKMM-DER 210
>KYP42578.1 Pentatricopeptide repeat-containing protein At1g11290 family
[Cajanus cajan]
Length = 770
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 7 GNESLVVLQRMLDTYNEPTSITFIYVLSACAHTGKA------TLLGACRTHGNIEIGAKA 60
G+ +L V RM++ +P TF+ +L+AC+H+G LL CRTH NI +G K
Sbjct: 530 GHYALRVYGRMIEESLKPNQTTFVSLLTACSHSGLVKEDVLEALLSGCRTHKNINMGIKI 589
Query: 61 ANRFIQLECSNVALMASLQ-IFTQVQKDERIHY 92
A+R I L+ N + L I+ + ++ E ++Y
Sbjct: 590 ADRLISLDYLNSGIYVMLSNIYAEARRWESVNY 622
>XP_008237400.1 PREDICTED: pentatricopeptide repeat-containing protein At3g49710
[Prunus mume]
Length = 720
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 39 TGKATLLGACRTHGNIEIGAKAANRFIQLECSNVA 73
G ATLLGACRTHGNIE+ KAAN+F+QL+ SN A
Sbjct: 515 VGWATLLGACRTHGNIELAVKAANQFLQLDPSNAA 549