BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0020.1
(193 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010268836.1 PREDICTED: F-box protein At1g61340-like [Nelumbo ... 142 1e-39
XP_006467897.1 PREDICTED: F-box protein At1g61340 [Citrus sinens... 127 1e-33
XP_006352592.1 PREDICTED: F-box protein SKIP27-like [Solanum tub... 126 1e-33
>XP_010268836.1 PREDICTED: F-box protein At1g61340-like [Nelumbo nucifera]
Length = 193
Score = 142 bits (359), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 115/174 (66%), Gaps = 4/174 (2%)
Query: 21 ALNEGSEFVNCTRTLRRKRVSVSNLSEMDALDFNSPMKINSKKRNISQVDSKNISLDSLP 80
A+++G V TR + RKRV+VSN +E+ L SP + KKR+ + + L++LP
Sbjct: 23 AVDKGLGIVYYTRAMGRKRVAVSNCAEVSPL--TSPSRTPLKKRHSIRKNVAKSLLEALP 80
Query: 81 QDILVKILCFVDHDDLDKLLCVSMPIKEATLIAKQWHFEFSTPNSKTCGVKNFNEFEDDP 140
Q+ILV++LC VDHDDL +L VS I+EATLIAKQ HF + TP+ GV++F+ ED
Sbjct: 81 QEILVQVLCGVDHDDLKQLFHVSKTIREATLIAKQSHFAYCTPSKSLAGVRSFSVVEDSS 140
Query: 141 RRFNMETPNAPIREQGFCRRQISREKLAEITISLFHSPEESKN-KKGLFMETEM 193
+ E PNAP R+Q +++R+KLA+I+++LFHSPEE + K L +ETE+
Sbjct: 141 KLDAEEAPNAP-RQQRILGSRLNRKKLADISVALFHSPEEKQWLKNSLLLETEI 193
>XP_006467897.1 PREDICTED: F-box protein At1g61340 [Citrus sinensis] KDO75717.1
hypothetical protein CISIN_1g029717mg [Citrus sinensis]
Length = 189
Score = 127 bits (319), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 123/200 (61%), Gaps = 21/200 (10%)
Query: 1 MALGKR--SIKRAYSLNDSTLKALNEGSEFVNCTRTLRRKRVSVSNLSEMDALDFNSPMK 58
MALG+ S+K + ST + L G FV TR L RKR+ ++N E + F+S K
Sbjct: 1 MALGQNCSSLKSRRGVA-STGEGLGLG--FVRYTRGLGRKRILIANGEETSS--FDSATK 55
Query: 59 INSKKRNISQ------VDSKNISLDSLPQDILVKILCFVDHDDLDKLLCVSMPIKEATLI 112
+S KR S+ D K+ L++LPQDIL++ILC V+H+DL +L VS PI+EATLI
Sbjct: 56 SSSLKRQCSEKMIDFNCDEKS-RLEALPQDILIRILCGVNHEDLKQLFHVSRPIREATLI 114
Query: 113 AKQWHFEFSTPNSKTCGVKNFNEFEDDPRRFNMETPNAPIREQGFCRRQISREKLAEITI 172
AKQWHF ++TP KT K ++ED +E PNAP + + + + +++ +KLA+I++
Sbjct: 115 AKQWHFAYNTPR-KTRVFKTSIDYEDPIENAEVEAPNAPRQMRAY-KSRLTSQKLADISV 172
Query: 173 SLFHSPEESKNKKGLFMETE 192
+LF SP KK LFME E
Sbjct: 173 ALFASP-----KKNLFMEEE 187
>XP_006352592.1 PREDICTED: F-box protein SKIP27-like [Solanum tuberosum]
XP_006352593.1 PREDICTED: F-box protein SKIP27-like
[Solanum tuberosum]
Length = 177
Score = 126 bits (317), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 23 NEGSEFVNCTRTLRRKRVSVSNLSEMDALDFNSPMKINSKKRNISQVDSKNISLDSLPQD 82
N G V T + RKRV + N+ ++D + KI K + V S L++LPQD
Sbjct: 10 NVGFGLVRST-SFGRKRVCLPNIRDLDFISTTPTKKICRKNSFSTCVKS---PLEALPQD 65
Query: 83 ILVKILCFVDHDDLDKLLCVSMPIKEATLIAKQWHFEFSTPNSKTCGVKNFNEFEDDPRR 142
IL++I+C V+HDDL +L VS PI+EATL+AK+WHFE+STP +KT G KN + ++
Sbjct: 66 ILIRIVCGVEHDDLKRLFHVSKPIREATLVAKRWHFEYSTP-TKTLGFKNATDIDNWSES 124
Query: 143 FNMETPNAPIREQGFCRRQISREKLAEITISLFHS-PEESKNKKGLFMETE 192
N+E PNAP R+ F R ++SR+KLA+I+++LF S EE+ ++ LFM+ +
Sbjct: 125 NNVEVPNAP-RQSKFPRARLSRKKLADISVALFTSDSEENWPRRELFMQMD 174