BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0120.1
(164 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN62499.1 hypothetical protein VITISV_000082 [Vitis vinifera] 141 9e-40
KYP64702.1 Retrovirus-related Pol polyprotein from transposon TN... 142 3e-39
KYP37885.1 Retrovirus-related Pol polyprotein from transposon TN... 130 8e-33
>CAN62499.1 hypothetical protein VITISV_000082 [Vitis vinifera]
Length = 190
Score = 141 bits (356), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 107/160 (66%), Gaps = 21/160 (13%)
Query: 5 HWQLTSGFRGELSPTTDDEAVYMSRVPYANAVGSIMYAMVCTRPDISHDVSVVSRYMGKL 64
H++L++ P DDE MS+VPYA+A+G +MYAMVCTRPD++H VSVVS+++
Sbjct: 14 HFRLSTN----QCPKIDDEVKDMSKVPYASAMGCLMYAMVCTRPDLAHAVSVVSKFLSNP 69
Query: 65 GRGHWQAAKWILRYLGGTAELGL---QEVAEV----YLD----------NQSAIHLTKNQ 107
GR W A KWI RYL GT + GL ++ +++ Y+D +QSAI+L KNQ
Sbjct: 70 GRMDWDAVKWIFRYLRGTIDYGLMFSKQQSDLLVMGYVDVDYARNLDDESQSAIYLAKNQ 129
Query: 108 MYHDRTKNIDVRYHFIKDVIEQGKITMKKVSTTKNIQALL 147
+YH RTK+IDVR+H I++++ G++ ++KV T+KN +L
Sbjct: 130 VYHARTKHIDVRFHKIRELVSSGELLLEKVHTSKNATDML 169
>KYP64702.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 279
Score = 142 bits (359), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 51/198 (25%)
Query: 8 LTSGFRGELS--PTTDDEAVYMSRVPYANAVGSIMYAMVCTRPDISHDVSVVSRYMGKLG 65
L + F+ + S P+TD+E YM+ VPY++AVGS+MYAMVCTRPD++H VSVVSR+M G
Sbjct: 74 LATHFKLDASTLPSTDEEKEYMNTVPYSSAVGSLMYAMVCTRPDLAHAVSVVSRFMSNPG 133
Query: 66 RGHWQAAKWILRYLGGTAELGL------------------------------QEVAE--- 92
+ HW+A KWI+RYL GT+ + L + V E
Sbjct: 134 KAHWEAVKWIMRYLKGTSNICLVYGSNDIGWKATLQPTVALSTTEAEYMSLTEGVKEGIW 193
Query: 93 ----------------VYLDNQSAIHLTKNQMYHDRTKNIDVRYHFIKDVIEQGKITMKK 136
+Y D+QSA+ L KN +YH+R+K+IDVR++FI+DVIE+ +++K
Sbjct: 194 LQGLIDSLGLNVQRRILYCDSQSALCLAKNPVYHERSKHIDVRFNFIRDVIEEKLFSIEK 253
Query: 137 VSTTKNIQALLRLDWDFQ 154
++T N +L F+
Sbjct: 254 IATVDNPADMLTKPLSFE 271
>KYP37885.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 464
Score = 130 bits (326), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 88/126 (69%), Gaps = 9/126 (7%)
Query: 17 SPTTDDEAVYMSRVPYANAVGSIMYAMVCTRPDISHDVSVVSRYMGKLGRGHWQAAKWIL 76
SP+ +++ +MS +PYANA+GS+MYAMV +R DI+ + S+VSR+MG G+ HW W+L
Sbjct: 320 SPSNEEDYKFMSNIPYANAIGSLMYAMVYSRSDIACEASLVSRFMGNPGKKHWMEVNWML 379
Query: 77 RYLGGTAELGLQEVAEVYLDNQSAIHLTKNQMYHDRTKNIDVRYHFIKDVIEQGKITMKK 136
RYL T ++GL+ SAI L KNQ +H+RTK+I+VR+HFI+D+I +G + + K
Sbjct: 380 RYLKRTPDIGLRF---------SAICLFKNQKFHERTKHINVRFHFIRDIIPKGVLQVSK 430
Query: 137 VSTTKN 142
+ T N
Sbjct: 431 IGTENN 436