BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0260.1
(149 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC95126.1 gag-pol polyprotein [Populus deltoides] 129 7e-32
XP_006386920.1 hypothetical protein POPTR_0002s26165g [Populus t... 103 5e-26
XP_015573266.1 PREDICTED: uncharacterized protein LOC107261076 [... 99 9e-23
>CAC95126.1 gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 129 bits (323), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 95/161 (59%), Gaps = 26/161 (16%)
Query: 2 ALHSDFESIRSTILHSKPLPSIAKVVNELMAKETRLKYQERKCILQTPTGTMLAVHLKPN 61
AL SDFE +R +ILH PLPS+ VV+EL+A+E RL+ K IL ++LAV KP
Sbjct: 170 ALRSDFEGLRGSILHRSPLPSVDSVVSELLAEEIRLQSYSEKGILSASNPSVLAVPSKPF 229
Query: 62 QNHQNKPYTKVVMDECSFCTQKGHWKAQCLKLMNKSQ-----------QNQRPQ--KPFQ 108
NHQNKPYT+V DECSFC QKGHWKAQC KL ++Q ++ PQ KP
Sbjct: 230 SNHQNKPYTRVGFDECSFCKQKGHWKAQCPKLRQQNQAWKSGSQSQSNAHRSPQGYKPPH 289
Query: 109 YNTAPVILPSDSSGSSGSSSSVPKTDTVVDQFQMFQKFLAM 149
+NTA V P S+ +T+ +Q FQKFL++
Sbjct: 290 HNTAAVASP----------GSITDPNTLAEQ---FQKFLSL 317
>XP_006386920.1 hypothetical protein POPTR_0002s26165g [Populus trichocarpa]
ERP64717.1 hypothetical protein POPTR_0002s26165g
[Populus trichocarpa]
Length = 114
Score = 103 bits (257), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 1 MALHSDFESIRSTILHSKPLPSIAKVVNELMAKETRLKYQERKCILQTPTGTMLAVHLKP 60
MALHSDF+ + ILH PL SI VV+EL+A+E RL+ I T ++LA KP
Sbjct: 1 MALHSDFKGLIVLILHYSPLSSIDSVVSELLAEEIRLQSYSENGIRYTSHYSVLATPSKP 60
Query: 61 NQNHQNKPYTKVVMDECSFCTQKGHWKAQCLKLMNKSQQNQ 101
N+QNKPYT+V DE SFC QKGHWKAQC KL QQNQ
Sbjct: 61 FFNNQNKPYTRVAFDEFSFCKQKGHWKAQCPKL---RQQNQ 98
>XP_015573266.1 PREDICTED: uncharacterized protein LOC107261076 [Ricinus communis]
Length = 247
Score = 99.0 bits (245), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%)
Query: 1 MALHSDFESIRSTILHSKPLPSIAKVVNELMAKETRLKYQERKCILQTPTGTMLAVHLKP 60
MAL +FE +R +ILH PLPS+ VV+EL+A+E RLK K + T T ++ + +
Sbjct: 138 MALRDEFEGLRGSILHRHPLPSMDSVVSELLAEEIRLKSSVVKEVSSTSTPSVFVMLPRS 197
Query: 61 NQNHQNKPYTKVVMDECSFCTQKGHWKAQCLKL 93
N Q +PY V DEC FC QKGHWK+QCLKL
Sbjct: 198 NSKSQFRPYGSVARDECGFCKQKGHWKSQCLKL 230