BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0290.1
(479 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 406 e-132
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 363 e-117
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 357 e-108
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 406 bits (1044), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/478 (45%), Positives = 318/478 (66%), Gaps = 19/478 (3%)
Query: 12 KYEIEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGK--KPGDMSDEDWEELDLEARANIM 69
K++IEKF+GK FS W++QMK +L L K L GK KP +M+DE W+ELD +A + I
Sbjct: 6 KFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQ 65
Query: 70 LCLERDVAFLVDEETTAAGVWLKLESSFMTKTLTNRVYLKSKLFTCRMEESSSIQEYVNR 129
LCL ++V V ETTAA +WLKLES +MTK+L N++ LK +L+T RM E + IQ ++N
Sbjct: 66 LCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNE 125
Query: 130 FDRIISDLKDIDVKVEDEDQALILLLSLPKSYQNLVQTLMLVG-DSLSMEETRNSLLADD 188
F+ II DL++I++K++DED+A++L++SLP +Y++ + ++ D+LS E+ +++LL+ +
Sbjct: 126 FNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSFEDVKSNLLSKE 185
Query: 189 LRKVATSSMASGGVDKEQAQGLFVTRGRSNERGKGKGGKSRSKSRG-SFKKTCFSCGELG 247
+ S +++ +GL V RGR+ E+G KSRSKSRG KTC C + G
Sbjct: 186 KFDLDIHS-------EDKGEGLSV-RGRTQEKGSTSNKKSRSKSRGRKSNKTCRYCKKFG 237
Query: 248 H-----FKLKQKNEGYKEKQEMQEAGYVSEEADECFSVTEVSEKIFD-KWMLDSGASHHM 301
H F LK+K E ++ + EA V ++D ++ S+K +W+LDSG + HM
Sbjct: 238 HDISDCFILKKKQERQEKGKNPAEAANVETDSDGDVMISVSSDKRSKTEWILDSGCTFHM 297
Query: 302 CPNREWFTTYRSIDGGTVILSDDSICKTVGLGTIRIKMHDGVVRTLMDVRHIPDLRKNLI 361
CP ++ FTT +D G V++ +D+ CK G+GTI+IK HDG ++TL +VR IPDL++NLI
Sbjct: 298 CPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLI 357
Query: 362 SLGVLERNGCRIIIENSSIKVVKGSLVVMRGTRYGNLYKLLGTTITGDVAVGISGRDPTA 421
SLG LE GC+ E +KV KG++V+++ R G+LY L G+ +TG AV S D A
Sbjct: 358 SLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDA 417
Query: 422 STRLWHMRLGHMSEKGLSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSNHRSK 479
T+LWHMRLGHMSEKG+ L+ +GLL + +EFCEHCVFGK RV+FST+ HR+K
Sbjct: 418 -TKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTK 474
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 363 bits (933), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/484 (43%), Positives = 313/484 (64%), Gaps = 26/484 (5%)
Query: 10 AGKYEIEKFNGKNDFSYWRMQMKNLLISQKLHKTLTG--KKPGDMSDEDWEELDLEARAN 67
A K+EIEKF+ F W+++M+ +L Q L K L G K +S E+ +++D A A
Sbjct: 2 ATKFEIEKFDRNISFGIWQVKMRAILTQQGLQKALLGIEKMSSTLSQEEKQDMDERALAV 61
Query: 68 IMLCLERDVAFLVDEETTAAGVWLKLESSFMTKTLTNRVYLKSKLFTCRMEESSSIQEYV 127
I LCL +V V E +AA +WLKLES +MTK+LT++++LK +LF +M E +S++ ++
Sbjct: 62 IQLCLSNEVLREVIHEKSAAALWLKLESLYMTKSLTSKLHLKQRLFMLKMVEGTSVKTHL 121
Query: 128 NRFDRIISDLKDIDVKVEDEDQALILLLSLPKSYQNLVQTLMLVGDSLSMEETRNSLLAD 187
+ F+ I+ DL++++VK+EDEDQAL+LL SLP S+++ +TL+ DS+S+E+ ++SL +
Sbjct: 122 DEFNSILMDLENLEVKIEDEDQALLLLCSLPPSFKHFRETLLYGRDSISVEDVKSSLFSK 181
Query: 188 DLRKVATSSMASGGVDKEQAQGLFVTRGRSNERG-KGKGGKSRSKSRGSFKKTCFSCGEL 246
+L + +S GV ++GL V RGRS ER + K G+ RSKSR FK C C
Sbjct: 182 ELMDRDLTGCSSEGV----SEGL-VARGRSQERSFEKKKGERRSKSRNKFK-ICNYCKMK 235
Query: 247 GHFKLKQKNEGY-------KEKQEMQEAGYVSEEADEC----FSVTEVSEKIFDKWMLDS 295
GH K +E Y KE++ ++A V DEC SV V D+W+LDS
Sbjct: 236 GHIK----SECYGLKNKQKKEEKNPEKAAEVGVAKDECEDYVLSVNAVRSN--DEWILDS 289
Query: 296 GASHHMCPNREWFTTYRSIDGGTVILSDDSICKTVGLGTIRIKMHDGVVRTLMDVRHIPD 355
G S+HMCP ++ F TY DGG V++ +++ KT+G+G+IRIKM+DG+VRTL VRH+ D
Sbjct: 290 GYSYHMCPYKDRFHTYEHDDGGVVLMGNNAPRKTIGIGSIRIKMYDGIVRTLTQVRHVLD 349
Query: 356 LRKNLISLGVLERNGCRIIIENSSIKVVKGSLVVMRGTRYGNLYKLLGTTITGDVAVGIS 415
L+KNLISLG LE NGC+ E ++V +G+L++M+ R +LY L+GTT+TG A
Sbjct: 350 LKKNLISLGTLEANGCKYSAEGGVLRVSRGALILMKVKRTNSLYTLIGTTVTGAAAAVSP 409
Query: 416 GRDPTASTRLWHMRLGHMSEKGLSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSN 475
+ T+LWHMRLGHMSEKG++++ +GLL +EFCEHC+FGK +V+F T+
Sbjct: 410 SMSESEVTKLWHMRLGHMSEKGMTMLSKRGLLCGQSTGKVEFCEHCIFGKQRKVSFQTTI 469
Query: 476 HRSK 479
HR+K
Sbjct: 470 HRTK 473
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 357 bits (915), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/471 (40%), Positives = 296/471 (62%), Gaps = 15/471 (3%)
Query: 14 EIEKFNGKNDFSYWRMQMKNLLISQKLHKTLTGKKPGDMSDEDWEELDLEARANIMLCLE 73
+I+KF G+N FS W+++M+ LL Q L+ K ++ E L+ +A + IMLCL
Sbjct: 7 KIDKFTGRNSFSLWQIKMRALLKQQGFWAPLSKDKNAVVTPE-MAILEEKAHSTIMLCLA 65
Query: 74 RDVAFLVDEETTAAGVWLKLESSFMTKTLTNRVYLKSKLFTCRMEESSSIQEYVNRFDRI 133
DV V +E TAAG+WLKLES +MTK+LTN++ LK +LF RM E + ++E++ + + +
Sbjct: 66 DDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLNTL 125
Query: 134 ISDLKDIDVKVEDEDQALILLLSLPKSYQNLVQTLMLVGDSLSMEETRNSLLADDLRKVA 193
+ +L++IDVK+EDED ALILL+SLP S++N VQ+ ++ D++S+EE R++L + +LR
Sbjct: 126 LLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRH-- 183
Query: 194 TSSMASGGVDKEQAQGLFVTRGRSNERGKGKGGK-SRSKSRGSFKK-TCFSCGELGHFKL 251
A+G Q GLF S+ +G+ GGK ++ S+G+ C C E GH+K
Sbjct: 184 ---KANGTSTDIQPSGLFT----SSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEKGHWKF 236
Query: 252 KQKNEGYKEKQEMQEAGYVSEEADECFSVTEVSEKIF---DKWMLDSGASHHMCPNREWF 308
+ + +++ A E+ + + V+++ D W+LDSGAS+H+CP REWF
Sbjct: 237 DCPKKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRREWF 296
Query: 309 TTYRSIDGGTVILSDDSICKTVGLGTIRIKMHDGVVRTLMDVRHIPDLRKNLISLGVLER 368
TTY +DGG++ +++ S+CK VG G+I+I+ HDG TL +VRH+P + KNLISL +L+
Sbjct: 297 TTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDS 356
Query: 369 NGCRIIIENSSIKVVKGSLVVMRGTRYGNLYKLLGTTITGDVAVGISGRDPTASTRLWHM 428
G ++ ++V KGS ++++G G LY L G+T+TG V S T+LWH+
Sbjct: 357 KGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQKDMTKLWHI 416
Query: 429 RLGHMSEKGLSLMCGKGLLKDMKKPCMEFCEHCVFGKAHRVTFSTSNHRSK 479
RLGHM E+G+ ++ + LL K +EFCEHCVFGK HR F + HR+K
Sbjct: 417 RLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTK 467