BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0300.1
(788 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 812 0.0
ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 cop... 813 0.0
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 795 0.0
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/729 (56%), Positives = 523/729 (71%), Gaps = 28/729 (3%)
Query: 1 MRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAHYH 60
M SN+ L ++WAE+V+TACY++NRSP ++D P EVWSG A+Y L+VFGCTA+ H
Sbjct: 519 MLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAH 578
Query: 61 VKGNKLDNRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIVAMAKAT-VPSC 119
V KL+ R K IFLGY +GVKGY+LWC E KK VISR+VVF ES ++ +T VP
Sbjct: 579 VDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPSTNVP-- 636
Query: 120 GDVGSTKAQVVEVEAEDQRVSRNHDQVEHQDKTQDEEIDEPDHEEVQGEGTQVLQQQQQD 179
V S + V+VE +S H + +D I++ D ++ + ++QQ +
Sbjct: 637 --VESQEKVSVQVE---HLISSGH-----APEKEDVAINQ-DAPVIEDSDSSIVQQSPKR 685
Query: 180 VSVHTRPKRLYKPVQRLGSDKPLRHYGQANVVEYALSVEDD-----EPVTFKQAITAEER 234
RPKR KP P R+ +AN+V YALSV ++ EP T+ AI +++
Sbjct: 686 SIAKDRPKRNTKP--------PRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDC 737
Query: 235 ESWLVAMQEDMESLHTNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKG 294
W+ AM ++MESL N +WE+ LP+ K I CKW++K+KE S RYKARLVAKG
Sbjct: 738 NRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKG 797
Query: 295 YAQKEGVDYNEIFSPVVKHTSIRVPLSIVAHSDLELEQLDVKTAFLHGDLEEEIYMAQPE 354
Y+Q G+D+N++FSPVVKH+SIR LSIVA D ELEQ+DVKTAFLHG+LEE+IYM QPE
Sbjct: 798 YSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPE 857
Query: 355 GYKVEGKENQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLRECDF 414
G+ V GKEN VCRL+KSLYGLKQSPRQWYKRFD FML FRRS+YD CVY+K + +
Sbjct: 858 GFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVV-DGSA 916
Query: 415 IYLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQ 474
IYLLLYVDDMLIA++ EI KLK+QLS EFEMKD+GAAKKILGMEI RER S KLYL+Q
Sbjct: 917 IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQ 976
Query: 475 KDYVERVVSRFGMQNAKAVSTHLAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAM 534
K Y+E+V+ RF M +AK VST LA HFRLS P + + ++M RVPY+SAV SLMYAM
Sbjct: 977 KCYIEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAM 1036
Query: 535 VCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTTDTGLCFGGDTCQISGYVDSD 594
VC+RPD+S A+SVVSR+MANPGK HW+AV+W+ RYL+GT+ L FG + + GYVDSD
Sbjct: 1037 VCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSDGLVGYVDSD 1096
Query: 595 YAGDLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMTEGVKEALWLWGLLD 654
+AGDLDRRRS TGYVF V G VSW++ LQ+TVALSTTEAEYMA++E KE +WL GL
Sbjct: 1097 FAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAISEACKEVIWLRGLYT 1156
Query: 655 DLGIKQECVDVWCDSQSAIHLAKNQVHHARTKHIDVKYHFVRDVIEEGDVSLMKVHTNEN 714
+L C++++CDSQSAI L K+Q+ H RTKHID++YHF+R VI EGDV + K+ T++N
Sbjct: 1157 ELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDN 1216
Query: 715 PADMLTKVV 723
P DM+TK V
Sbjct: 1217 PVDMMTKPV 1225
>ABO36622.1 copia LTR rider [Solanum lycopersicum] ABO36636.1 copia LTR rider
[Solanum lycopersicum]
Length = 1307
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/729 (55%), Positives = 528/729 (72%), Gaps = 32/729 (4%)
Query: 1 MRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAHYH 60
M SN+GL +WAE+V+TACY++NR PH+ + P E+WSG+ ADY LK FGCTA+YH
Sbjct: 588 MLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYH 647
Query: 61 VKGNKLDNRAKKAIFLGYATGVKGYRLWCTEDKKFVISRDVVFDESSIV-AMAKATVPSC 119
V KL+ RAKK +F+GY GVKG+R+W +K+ ++SR+VVFDES ++ + K T S
Sbjct: 648 VSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTS- 706
Query: 120 GDVGSTKAQVVEVEAEDQRVSRNHDQVEHQDKTQDEEIDEPDHEEVQGEGTQVLQQQQQD 179
+ GS QV + +V +N ++ ++ E E D E + + Q QD
Sbjct: 707 -ETGSLDKQV------EFQVIQNESDLKEPEEEDQEPQTETDIPESMP--SDIHQSIAQD 757
Query: 180 VSVHTRPKRLYKPVQRLGSDKPLRHYGQANVVEYALSVEDD----EPVTFKQAITAEERE 235
RP+R+ G P R YG ++V YAL V ++ EP T+K+AI + + E
Sbjct: 758 -----RPRRV-------GVRPPTR-YGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSE 804
Query: 236 SWLVAMQEDMESLHTNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLVAKGY 295
W AM ++MESLH N+TW++V P G+ +I CKWV+KKKE S +G +YKAR+VA+G+
Sbjct: 805 KWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGF 864
Query: 296 AQKEGVDYNEIFSPVVKHTSIRVPLSIVAHSDLELEQLDVKTAFLHGDLEEEIYMAQPEG 355
Q+EGVDYNEIFSPVV+HTSIRV L+IVAH +LELEQLDVKTAFLHG+LEEEIYM QP+G
Sbjct: 865 NQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDG 924
Query: 356 YKVEGKENQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLRECDFI 415
++V GKEN VC+L+KSLYGLKQSPRQWYKRFD +M+K G+ RS YDCCVY +L + FI
Sbjct: 925 FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFI 984
Query: 416 YLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLNQK 475
YL+LYVDDMLIA++ +I KLK LS EFEMKD+GAA+KILGMEI R+R +KL+L+Q+
Sbjct: 985 YLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQR 1044
Query: 476 DYVERVVSRFGMQNAKAVSTHLAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLMYAMV 535
Y+++V++RFGM ++K + T A + L+ +P + EK++M RVPYASAVGSLMYAMV
Sbjct: 1045 SYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMV 1104
Query: 536 CTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTTDTGLCFGGDT-CQISGYVDSD 594
CTRPD++ AVSVVSRFM PG+ HW+AVK + RYL+GT+D GL +GGDT C ++GY DSD
Sbjct: 1105 CTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSD 1164
Query: 595 YAGDLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMTEGVKEALWLWGLLD 654
YAGD+D RRS TGYVF + G+ VSW++ LQ TV LSTTEAEYMA+TE KE +WL GL+
Sbjct: 1165 YAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVS 1224
Query: 655 DLGIKQECVDVWCDSQSAIHLAKNQVHHARTKHIDVKYHFVRDVIEEGDVSLMKVHTNEN 714
DLG+ + V+CDS SAI LAK+QVHH RTKHIDV+YHF+R E + + KV T +N
Sbjct: 1225 DLGLHHDQATVYCDSLSAICLAKDQVHHERTKHIDVRYHFLR---SEKRIKVKKVGTADN 1281
Query: 715 PADMLTKVV 723
PADM TK V
Sbjct: 1282 PADMFTKPV 1290
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/733 (54%), Positives = 519/733 (70%), Gaps = 30/733 (4%)
Query: 1 MRSNSGL--GVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAH 58
M SN+GL E W E+ +TACY++NRSPHSSL+ IP E+WSG DY L++FGC A+
Sbjct: 299 MLSNAGLWHQRELWVEAASTACYLINRSPHSSLNFKIPEEIWSGNPIDYSNLRIFGCPAY 358
Query: 59 YHVKGNKLDNRAKKAIFLGYATGVKGYRLWCTEDK--KFVISRDVVFDESSIVAMAKATV 116
HV KL RA K IFLGYA+ KGYRLWC+E K + ++SRDV F+E ++++ K +
Sbjct: 359 AHVNDGKLAPRAIKCIFLGYASESKGYRLWCSESKSRRLILSRDVTFNEDALLSSGKQSS 418
Query: 117 PSCGDVGSTKAQVVEVEAEDQRVSRNHDQVEHQDKTQDEEIDEPDHEEVQGEGTQVLQQQ 176
S + + +VE E + V+ N D T + ID DH G+ + QQ+
Sbjct: 419 VSSSSTNNLQGTSEKVELELKSVAPNVDV--PSSSTTESSID--DH----GDDHPIQQQE 470
Query: 177 QQDVSVHTRPKRLYKPVQRLGSDKPLRHYGQANVVEYALSV-----EDDEPVTFKQAITA 231
+ +++ R +R K R Y N+ YALS+ +D EP ++ +A++
Sbjct: 471 EYNIA-RDRTRRQIKLPAR---------YTDDNLTAYALSIAQEVNDDVEPASYSEAVSC 520
Query: 232 EERESWLVAMQEDMESLHTNKTWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGTRYKARLV 291
+ WLVAM E++ESLH N TW + LP+GK + CKW+YKKK+ ++ R KARLV
Sbjct: 521 VDSAKWLVAMNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLV 580
Query: 292 AKGYAQKEGVDYNEIFSPVVKHTSIRVPLSIVAHSDLELEQLDVKTAFLHGDLEEEIYMA 351
KG+ QKEG+D+NEIFSPVV+HTSIR+ L+ VA DLELEQLDVKTAFLHG+LEEEIYM
Sbjct: 581 VKGFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMD 640
Query: 352 QPEGYKVEGKENQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHGFRRSDYDCCVYIKKLRE 411
QPEG+ V KE+ VC+L+KSLYGLKQ+PRQWYK+FD FM+ G+ RS YD C+Y ++ +
Sbjct: 641 QPEGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPD 700
Query: 412 CDFIYLLLYVDDMLIASRSMVEINKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLY 471
FIYLLLYVDDMLIASR I+KLK+QL+ EFEMK++GAAKKILGMEI R+R KL+
Sbjct: 701 GTFIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLF 760
Query: 472 LNQKDYVERVVSRFGMQNAKAVSTHLAPHFRLSGKQSPTTTVEKDHMDRVPYASAVGSLM 531
L+Q+ Y+ER++ RF M N K VST LA HF+LS P T E + M VPYASAVGSLM
Sbjct: 761 LSQQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLM 820
Query: 532 YAMVCTRPDISQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTTDTGLCFG---GDTCQIS 588
YAMVCTRPD++ AVS+VSR+M NPGK HW AVKW+ RYLKGT++ GL F T ++
Sbjct: 821 YAMVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVA 880
Query: 589 GYVDSDYAGDLDRRRSTTGYVFRVHGAPVSWRSMLQSTVALSTTEAEYMAMTEGVKEALW 648
G+VDSDY GDLDRRRS +GY+F + + +SW++ LQS ALSTTEAEY++ TEGVKEALW
Sbjct: 881 GFVDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALW 940
Query: 649 LWGLLDDLGIKQECVDVWCDSQSAIHLAKNQVHHARTKHIDVKYHFVRDVIEEGDVSLMK 708
+ GL+ +LG+ Q+ + V+CDSQSAIHL KN +H +TKHIDVK+HF+RD++ G+V L K
Sbjct: 941 IRGLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQK 1000
Query: 709 VHTNENPADMLTK 721
VHT+ENPADMLTK
Sbjct: 1001 VHTSENPADMLTK 1013