BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0320.1
(209 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP66218.1 Copia protein [Cajanus cajan] 270 2e-89
ABF81447.1 NBS type disease resistance protein [Populus trichoca... 291 2e-89
KYP35061.1 Retrovirus-related Pol polyprotein from transposon TN... 269 1e-88
>KYP66218.1 Copia protein [Cajanus cajan]
Length = 192
Score = 270 bits (689), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 155/189 (82%)
Query: 1 MDTPDESHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGFVF 60
M+ P +HL AKR+LRY+KGT + GL+++ D+ L+GYSDSDW D+D+RKSTSGFVF
Sbjct: 1 MEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVF 60
Query: 61 FMGYTAFTWSSKKQPIVTLSTCEAEYVAARSMVCHAICLRNMLKHLQCPQVGPTEVFLDN 120
+MG TAFTW SKKQPIVTLSTCEAEYVAA S VCHAI LRN+LK L PQV PT++++DN
Sbjct: 61 YMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDN 120
Query: 121 KSAIALAKNPVCHERSKHIDTRYHFVREHVKEGDIEVMYCKSQDQIADIFTKPLKHDVFE 180
KSAIALAKNPV H+RSKHI TRYH++RE + D+++ Y K+ DQ+ADIFTKPLK +VF
Sbjct: 121 KSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFM 180
Query: 181 RLKWMLGMR 189
+L+ +LG++
Sbjct: 181 KLRSLLGVQ 189
>ABF81447.1 NBS type disease resistance protein [Populus trichocarpa]
Length = 972
Score = 291 bits (745), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 169/209 (80%), Gaps = 2/209 (0%)
Query: 1 MDTPDESHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGFVF 60
M+TPD+SHLN AKR+LRY+KGT+N+G+F+T +DF L+GYSDSDWGRDLDERKST+GFVF
Sbjct: 301 METPDQSHLNAAKRILRYIKGTMNEGMFYTSSKDFNLVGYSDSDWGRDLDERKSTTGFVF 360
Query: 61 FMGYTAFTWSSKKQPIVTLSTCEAEYVAARSMVCHAICLRNMLKHLQCPQVGPTEVFLDN 120
FMG T+FTWSSKKQ IVTLS+CEAEYVAA S VCH+I LRNMLK L PQ PT +++DN
Sbjct: 361 FMGDTSFTWSSKKQSIVTLSSCEAEYVAANSAVCHSIWLRNMLKFLGFPQENPTGIYIDN 420
Query: 121 KSAIALAKNPVCHERSKHIDTRYHFVREHVKEGDIEVMYCKSQDQIADIFTKPLKHDVFE 180
+SAIALAKNPV HERSKHIDTR+HF+REHVK +++++ C + DQ+ADIFTKPLK + F
Sbjct: 421 RSAIALAKNPVYHERSKHIDTRHHFIREHVKNEEVQLISCNTNDQVADIFTKPLKGEAFI 480
Query: 181 RLKWMLGMRKLRKFGLRGDVGKRGFKPNV 209
R+K L +G+ G VGK NV
Sbjct: 481 RMKSHSAAIALL-YGI-GGVGKTAIAKNV 507
>KYP35061.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP41722.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 240
Score = 269 bits (688), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 155/189 (82%)
Query: 1 MDTPDESHLNVAKRLLRYVKGTLNDGLFFTCEQDFMLIGYSDSDWGRDLDERKSTSGFVF 60
M+ P +HL AKR+LRY+KGT + GL+++ D+ L+GYSDSDW D+D+RKSTSGFVF
Sbjct: 49 MEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVF 108
Query: 61 FMGYTAFTWSSKKQPIVTLSTCEAEYVAARSMVCHAICLRNMLKHLQCPQVGPTEVFLDN 120
+MG TAFTW SKKQPIVTLSTCEAEYVAA S VCHAI LRN+LK L PQV PT++++DN
Sbjct: 109 YMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDN 168
Query: 121 KSAIALAKNPVCHERSKHIDTRYHFVREHVKEGDIEVMYCKSQDQIADIFTKPLKHDVFE 180
KSAIALAKNPV H+RSKHI TRYH++RE + D+++ Y K+ DQ+ADIFTKPLK +VF
Sbjct: 169 KSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFM 228
Query: 181 RLKWMLGMR 189
+L+ +LG++
Sbjct: 229 KLRSLLGVQ 237