BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0390.1
(113 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013645361.1 PREDICTED: zinc finger MYM-type protein 1-like [B... 112 1e-26
XP_009109963.1 PREDICTED: zinc finger MYM-type protein 1-like [B... 112 1e-26
XP_011468653.1 PREDICTED: zinc finger MYM-type protein 1-like [F... 110 3e-26
>XP_013645361.1 PREDICTED: zinc finger MYM-type protein 1-like [Brassica napus]
Length = 814
Score = 112 bits (280), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 58/77 (75%)
Query: 35 TTFIVNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRA 94
T IVNDT G GLF+EIQ+ L S DL IDDVRGQ YDNGSNMKG KG Q+R LD+N RA
Sbjct: 392 TFLIVNDTSGEGLFREIQNVLVSLDLNIDDVRGQGYDNGSNMKGKHKGVQKRFLDVNPRA 451
Query: 95 LYTACGYHSLNLTLSEL 111
YT CG HSLNL L ++
Sbjct: 452 FYTPCGCHSLNLALCDM 468
>XP_009109963.1 PREDICTED: zinc finger MYM-type protein 1-like [Brassica rapa]
Length = 590
Score = 112 bits (279), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/77 (67%), Positives = 58/77 (75%)
Query: 35 TTFIVNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRA 94
T IVNDT G GLF+EIQ+ L S DL IDDVRGQ YDNGSNMKG KG Q+R LD+N RA
Sbjct: 248 TFLIVNDTSGEGLFREIQNVLVSLDLDIDDVRGQGYDNGSNMKGKHKGVQKRFLDVNPRA 307
Query: 95 LYTACGYHSLNLTLSEL 111
YT CG HSLNL L ++
Sbjct: 308 FYTPCGCHSLNLALCDM 324
>XP_011468653.1 PREDICTED: zinc finger MYM-type protein 1-like [Fragaria vesca
subsp. vesca]
Length = 559
Score = 110 bits (276), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 37 FIVNDTPGSGLFQEIQSSLKSFDLKIDDVRGQEYDNGSNMKGYKKGAQRRLLDINLRALY 96
+VNDT G GLF+E+++ L DL I+DVRGQ YDNGSNMKG KG Q++LLDIN RA Y
Sbjct: 96 LVVNDTTGQGLFEELKNVLHHLDLDINDVRGQGYDNGSNMKGKHKGVQKKLLDINPRAFY 155
Query: 97 TACGYHSLNLTLSELNN 113
T CG HSLNLTLS++ N
Sbjct: 156 TPCGSHSLNLTLSDVAN 172