BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0410.1
(281 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 260 2e-83
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 262 3e-77
KYP67041.1 Retrovirus-related Pol polyprotein from transposon TN... 237 7e-74
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 260 bits (664), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 194/279 (69%), Gaps = 20/279 (7%)
Query: 3 KYEIEKFDGSNDFNLWKIKMRAVLLQQGLLKTLNGKAALAESLSEVEKEDLIERAHGQIL 62
KYEIEKF+G NDF+LW++KM A+L+QQGLLK L GK L +LS+ EK+DL+E+AH IL
Sbjct: 7 KYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAIL 66
Query: 63 LFLSNEVLRQVATDTTTNGVWSKLETRYMTKSLTNHLYLKKKLFSLQMLEGESLKDHIDE 122
L LS+EVLR+V + + +W KLE+ Y+TKSLTN LY+K++L++L+M EG S+ HIDE
Sbjct: 67 LTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHIDE 126
Query: 123 LNRVFLDLANIDVKFEDEDKAVLLFASLPPSYESFVDSFMSGKTTTTFEDVKAASNSKEL 182
NRV LDL NIDVK EDED A++L LPPSYE+FVD+ + G+ T TFEDV+A NSKEL
Sbjct: 127 FNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSKEL 186
Query: 183 RRR--SMKESNSGDSLVI-RGRTQQLG-DGKGRSRSKSKPRKYRCFNCKKEGHFRKNYPE 238
+++ ++ N + LV+ RGR ++ G D KG+SR+K K C+NC ++GHFR++ +
Sbjct: 187 KKKVGGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAKGKT----CWNCGQKGHFRQDCTK 242
Query: 239 LR------KKPSEAAVIEEDDGSVLAIIEECDEAMVLAI 271
+ K + A V+ +D EE D VLAI
Sbjct: 243 FKDDEKFNKSENTANVVGDD----FDTFEETDN--VLAI 275
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 262 bits (669), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/279 (50%), Positives = 195/279 (69%), Gaps = 20/279 (7%)
Query: 3 KYEIEKFDGSNDFNLWKIKMRAVLLQQGLLKTLNGKAALAESLSEVEKEDLIERAHGQIL 62
KYEIEKF+G NDF+LW++KMRA+L+QQGLLK L GK L +LS+ EK+DL+++AH IL
Sbjct: 129 KYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVIL 188
Query: 63 LFLSNEVLRQVATDTTTNGVWSKLETRYMTKSLTNHLYLKKKLFSLQMLEGESLKDHIDE 122
L LS+EVLR+V + + VW KLE+ YMTKSLTN LY+K++L++L+M EG S+ HIDE
Sbjct: 189 LALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHIDE 248
Query: 123 LNRVFLDLANIDVKFEDEDKAVLLFASLPPSYESFVDSFMSGKTTTTFEDVKAASNSKEL 182
NRV LDL NIDVK EDED A++L LPPSYE+FVD+ + G+ T TFEDV+A+ N KEL
Sbjct: 249 FNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFKEL 308
Query: 183 RRR--SMKESNSGDSLVI-RGRTQQLG-DGKGRSRSKSKPRKYRCFNCKKEGHFRKNYPE 238
+++ ++ N + LV+ RGR ++ G D KG+SR+K K C+NC ++GHFR++ +
Sbjct: 309 KKKVGGIRNENQAEGLVVNRGRGKEKGLDRKGKSRAKGKT----CWNCGQKGHFRQDCTK 364
Query: 239 LR------KKPSEAAVIEEDDGSVLAIIEECDEAMVLAI 271
+ K + A V+ +D EE D VLAI
Sbjct: 365 FKDDEKFNKSENTANVVGDD----FDTFEETDN--VLAI 397
>KYP67041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 325
Score = 237 bits (605), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 124/284 (43%), Positives = 184/284 (64%), Gaps = 9/284 (3%)
Query: 3 KYEIEKFDGSNDFNLWKIKMRAVLLQQGLLKTLNGKAALAESLSEVEKEDLIERAHGQIL 62
K++I+KF+GSNDF LWK+KM+AVL+ QG L G L ++++ K+ ++E+AH IL
Sbjct: 5 KFDIDKFNGSNDFTLWKLKMKAVLVHQGCAAALEGADKLPTTMTDDVKKAMLEKAHSLIL 64
Query: 63 LFLSNEVLRQVATDTTTNGVWSKLETRYMTKSLTNHLYLKKKLFSLQMLEGESLKDHIDE 122
L L++EVLR+V +TT G+W LE ++ KSLTN LY K++L++LQM E S++DH+D
Sbjct: 65 LSLTDEVLREVGEETTAAGMWKMLEDKFQKKSLTNRLYQKQRLYTLQMSENMSVRDHLDN 124
Query: 123 LNRVFLDLANIDVKFEDEDKAVLLFASLPPSYESFVDSFMSGKTTTTFEDVKAASNSKEL 182
NR+ LDL +I VK +DED A++L SLP SYE+F+D+ + G+ + T +VK + SK+L
Sbjct: 125 FNRIILDLQSIGVKVDDEDLAIILLCSLPKSYENFIDTMLYGRDSITLNNVKDSLQSKKL 184
Query: 183 RRRSMKESNSGDS--LVIRGRTQQLGD---GKGRSRSKSKPRKYRCFNCKKEGHFRKNYP 237
+RR + SN D V RGR+ + G+ G RS S SK +K RC+ CK+ GH RKN P
Sbjct: 185 KRRVVSSSNVDDVGLTVSRGRSMERGNSSKGHTRSNSLSKSKKVRCYKCKEVGHIRKNCP 244
Query: 238 ELRKK---PSEAAVIEEDDGSVLAIIEECDEAMVLAIN-VCFAE 277
+L+K + AAV+ +E D VL ++ + FA+
Sbjct: 245 QLKKNRNSNASAAVVRSSATVSSESSDEGDGGDVLTVSTIGFAD 288