BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0420.1
(147 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP48513.1 Retrovirus-related Pol polyprotein from transposon TN... 206 3e-59
JAT57914.1 Retrovirus-related Pol polyprotein from transposon TN... 198 2e-58
KYP71220.1 Retrovirus-related Pol polyprotein from transposon TN... 198 2e-57
>KYP48513.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 206 bits (525), Expect = 3e-59, Method: Composition-based stats.
Identities = 91/147 (61%), Positives = 118/147 (80%)
Query: 1 MLIGNDALCKVVGIGTIQIKMHDGVVRIITDIRHVPDLKRNLISLGTLDDNGCRYTGEGG 60
+L+GND CK+ GIGTIQIK HDG ++ ++++R +PDLKRNLISLGTL+ GC+Y+ EGG
Sbjct: 19 VLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGG 78
Query: 61 VLRISKGSLTVMKGLKKNGLYVLQGNTITRSVAVSSSDKEVQTTKLWHMRLGHMSERGMP 120
VL++SKG++ ++K + LY+LQG+ +T S AVSSS + TKLWHMRLGHMSE+GM
Sbjct: 79 VLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMH 138
Query: 121 ILSKQGLLCGQKVGKLEFCEDCVFGKQ 147
+LSKQGLL Q +GKLEFCE CVFGKQ
Sbjct: 139 LLSKQGLLGNQGIGKLEFCEHCVFGKQ 165
>JAT57914.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 529
Score = 198 bits (503), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 120/148 (81%), Gaps = 1/148 (0%)
Query: 1 MLIGNDALCKVVGIGTIQIKMHDGVVRIITDIRHVPDLKRNLISLGTLDDNGCRYTGEGG 60
+L+GN+A K +GIG+I+IKM+DG+VR +T +RHV DLK+NLISLGTL+ NGC+Y+ EGG
Sbjct: 313 VLMGNNAPRKTIGIGSIRIKMYDGIVRTLTQVRHVLDLKKNLISLGTLEANGCKYSAEGG 372
Query: 61 VLRISKGSLTVMKGLKKNGLYVLQGNTIT-RSVAVSSSDKEVQTTKLWHMRLGHMSERGM 119
VLR+S+G+L +MK + N LY L G T+T + AVS S E + TKLWHMRLGHMSE+GM
Sbjct: 373 VLRVSRGALILMKVKRTNSLYTLIGTTVTGAAAAVSPSMSESEVTKLWHMRLGHMSEKGM 432
Query: 120 PILSKQGLLCGQKVGKLEFCEDCVFGKQ 147
+LSK+GLLCGQ GK+EFCE C+FGKQ
Sbjct: 433 TMLSKRGLLCGQSTGKVEFCEHCIFGKQ 460
>KYP71220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 198 bits (504), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 118/147 (80%)
Query: 1 MLIGNDALCKVVGIGTIQIKMHDGVVRIITDIRHVPDLKRNLISLGTLDDNGCRYTGEGG 60
+L+GND CK+ GIGTIQIK HDG ++ ++++R +PDLKRNLISLGTL+ GC+Y+ EGG
Sbjct: 315 VLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAEGG 374
Query: 61 VLRISKGSLTVMKGLKKNGLYVLQGNTITRSVAVSSSDKEVQTTKLWHMRLGHMSERGMP 120
VL++SKG++ ++K + LY+LQG+ +T S AVSSS + TKLWHMRLGHMSE+GM
Sbjct: 375 VLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMH 434
Query: 121 ILSKQGLLCGQKVGKLEFCEDCVFGKQ 147
+LSKQGLL Q +GKLEFCE CVFGKQ
Sbjct: 435 LLSKQGLLGNQGIGKLEFCEHCVFGKQ 461