BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0440.1
(629 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP44533.1 Retrovirus-related Pol polyprotein from transposon TN... 583 0.0
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TN... 583 0.0
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TN... 573 0.0
>KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 583 bits (1502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/567 (53%), Positives = 400/567 (70%), Gaps = 26/567 (4%)
Query: 1 MSNMIQP-QIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCV 59
M+N P Q+P LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ QK
Sbjct: 1 MANTGVPFQVPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDS 58
Query: 60 LKDSRKMDKKALILIYQGIDGPTFEKVSEAKSSKEAWNILKNSFRGVDKVVKVRLQILRG 119
L+DSRK DKKAL LIYQG+D TFEK+S K++KEAW LK S++G D+V KVRLQ LRG
Sbjct: 59 LRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRG 118
Query: 120 EFERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEE 179
EFE L M EGELVSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE
Sbjct: 119 EFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEE 178
Query: 180 SKDLESMTVDELMGTLQIHEQRVSRNVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY- 237
+KDLE+M++++L+G+LQ +E++ + V+QV +A + + +E+ Q R Y
Sbjct: 179 TKDLEAMSIEQLLGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYS 233
Query: 238 ESYGRGYDNGRRGFGNQRGRIFFNRGRTNEP--RGRGRGNFTRPYNSQGRDKRDIECYNC 295
+ GRG R +G+ +GR N + E RGRGRGN Y DK I+CYNC
Sbjct: 234 QEQGRG-----RAYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNC 283
Query: 296 HKLGHYSNECWY--KNEVKEESNLVEDEVEINVDPTLLFSCDGLDESQTNTWYFDTGASN 353
+K GHY++EC KN+V+E++N E+ + D TLL + G D+ + N WY D+GASN
Sbjct: 284 NKFGHYASECRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASN 341
Query: 354 HICGKRELFVEVNESVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYISDVYYVPAMKNN 413
H+CGKR +FVE++ESVKG V FGD SK+ V GKGN+LI+LKNG+H +IS+VYYVP+MK+N
Sbjct: 342 HMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSN 401
Query: 414 ILSLGQLLEKGYDIRLKDLHLTLSDRSGTLIAKVKMAKNRLFPLNIQHGDAKCLNSIVKD 473
ILSLGQLLEKGYDI+LK+ +L++ D + IAKV M +NR+F LNIQ +CL KD
Sbjct: 402 ILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKD 461
Query: 474 ESWLWHLRLGHLNFDGMKTLASKNMVRGLPCIDHPNKVCEGCIFGKHHRTSFSKEGRWRA 533
+SWLWHLR GHLNF G++ L+ K MVRGLPCI HPN+VCEGC+ GK R SF KE RA
Sbjct: 462 QSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRA 521
Query: 534 SNILELVHTDVCGPLKPMTNGAASSMV 560
LEL+HTDVCGP+KP + G ++ +
Sbjct: 522 QKPLELIHTDVCGPIKPRSLGKSNYFL 548
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%)
Query: 555 AASSMVCHAIWLRNMLKHLQCPQVGPTKVFLDNKSAIALAKNPVCHKRSKHIDTRYHFIR 614
AA+S VCHAIWLRN+LK L PQV PTK+++DNKSAIALAKNPV H RSKHI TRYH+IR
Sbjct: 1238 AATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIR 1297
Query: 615 EHVKGGDIEVMYCKS 629
E + D+++ Y K+
Sbjct: 1298 ECISNKDVQMEYVKT 1312
>KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 583 bits (1502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/567 (53%), Positives = 400/567 (70%), Gaps = 26/567 (4%)
Query: 1 MSNMIQP-QIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCV 59
M+N P Q+P LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ QK
Sbjct: 1 MANTGVPFQVPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDS 58
Query: 60 LKDSRKMDKKALILIYQGIDGPTFEKVSEAKSSKEAWNILKNSFRGVDKVVKVRLQILRG 119
L+DSRK DKKAL LIYQG+D TFEK+S K++KEAW LK S++G D+V KVRLQ LRG
Sbjct: 59 LRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRG 118
Query: 120 EFERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEE 179
EFE L M EGELVSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE
Sbjct: 119 EFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEE 178
Query: 180 SKDLESMTVDELMGTLQIHEQRVSRNVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY- 237
+KDLE+M++++L+G+LQ +E++ + V+QV +A + + +E+ Q R Y
Sbjct: 179 TKDLEAMSIEQLLGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYS 233
Query: 238 ESYGRGYDNGRRGFGNQRGRIFFNRGRTNEP--RGRGRGNFTRPYNSQGRDKRDIECYNC 295
+ GRG R +G+ +GR N + E RGRGRGN Y DK I+CYNC
Sbjct: 234 QEQGRG-----RAYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNC 283
Query: 296 HKLGHYSNECWY--KNEVKEESNLVEDEVEINVDPTLLFSCDGLDESQTNTWYFDTGASN 353
+K GHY++EC KN+V+E++N E+ + D TLL + G D+ + N WY D+GASN
Sbjct: 284 NKFGHYASECRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASN 341
Query: 354 HICGKRELFVEVNESVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYISDVYYVPAMKNN 413
H+CGKR +FVE++ESVKG V FGD SK+ V GKGN+LI+LKNG+H +IS+VYYVP+MK+N
Sbjct: 342 HMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSN 401
Query: 414 ILSLGQLLEKGYDIRLKDLHLTLSDRSGTLIAKVKMAKNRLFPLNIQHGDAKCLNSIVKD 473
ILSLGQLLEKGYDI+LK+ +L++ D + IAKV M +NR+F LNIQ +CL KD
Sbjct: 402 ILSLGQLLEKGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKD 461
Query: 474 ESWLWHLRLGHLNFDGMKTLASKNMVRGLPCIDHPNKVCEGCIFGKHHRTSFSKEGRWRA 533
+SWLWHLR GHLNF G++ L+ K MVRGLPCI HPN+VCEGC+ GK R SF KE RA
Sbjct: 462 QSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRA 521
Query: 534 SNILELVHTDVCGPLKPMTNGAASSMV 560
LEL+HTDVCGP+KP + G ++ +
Sbjct: 522 QKPLELIHTDVCGPIKPRSLGKSNYFL 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 61/75 (81%)
Query: 555 AASSMVCHAIWLRNMLKHLQCPQVGPTKVFLDNKSAIALAKNPVCHKRSKHIDTRYHFIR 614
AA+S VCHAIWLRN+LK L PQV PTK+++DNKSAIALAKNPV H RSKHI TRYH+IR
Sbjct: 1238 AATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIR 1297
Query: 615 EHVKGGDIEVMYCKS 629
E + D+++ Y K+
Sbjct: 1298 ECISNKDVQMEYVKT 1312
>KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1331
Score = 573 bits (1478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/555 (53%), Positives = 391/555 (70%), Gaps = 25/555 (4%)
Query: 12 LTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCVLKDSRKMDKKAL 71
LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ QK L+DSRK DKKAL
Sbjct: 2 LTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDSLRDSRKRDKKAL 59
Query: 72 ILIYQGIDGPTFEKVSEAKSSKEAWNILKNSFRGVDKVVKVRLQILRGEFERLSMNEGEL 131
LIYQG+D TFEK+S K++KEAW LK S++G D+V KVRLQ LRGEFE L M EGEL
Sbjct: 60 CLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHMKEGEL 119
Query: 132 VSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEESKDLESMTVDEL 191
VSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE+KDLE+M++++L
Sbjct: 120 VSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQL 179
Query: 192 MGTLQIHEQRVSRNVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY-ESYGRGYDNGRR 249
+G+LQ +E++ + V+QV +A + + +E+ Q R Y + GRG R
Sbjct: 180 LGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYSQEQGRG-----R 229
Query: 250 GFGNQRGRIFFNRGRTNEP--RGRGRGNFTRPYNSQGRDKRDIECYNCHKLGHYSNECWY 307
+G+ +GR N + E RGRGRGN Y DK I+CYNC+K GHY++EC
Sbjct: 230 AYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNCNKFGHYASECRA 284
Query: 308 --KNEVKEESNLVEDEVEINVDPTLLFSCDGLDESQTNTWYFDTGASNHICGKRELFVEV 365
KN+V+E++N E+ + D TLL + G D+ + N WY D+GASNH+CGKR +FVE+
Sbjct: 285 PNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVEL 342
Query: 366 NESVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYISDVYYVPAMKNNILSLGQLLEKGY 425
+ESVKG V FGD SK+ V GKGN+LIQLKNG+H +IS++YYVP+MK+NILSLGQLLEKGY
Sbjct: 343 DESVKGNVAFGDESKVAVEGKGNVLIQLKNGEHQFISNIYYVPSMKSNILSLGQLLEKGY 402
Query: 426 DIRLKDLHLTLSDRSGTLIAKVKMAKNRLFPLNIQHGDAKCLNSIVKDESWLWHLRLGHL 485
DI+LK+ +L++ D + I KV M +NR+F LNIQ +CL KD+SWLWHLR GHL
Sbjct: 403 DIQLKNNNLSIRDNTSRFITKVPMMRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHL 462
Query: 486 NFDGMKTLASKNMVRGLPCIDHPNKVCEGCIFGKHHRTSFSKEGRWRASNILELVHTDVC 545
NF G+ L+ K MVRGLPCI HPN+VCEGC+ GK R SF KE RA LEL+HTDVC
Sbjct: 463 NFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVC 522
Query: 546 GPLKPMTNGAASSMV 560
GP+KP + G ++ +
Sbjct: 523 GPIKPRSLGKSNYFL 537
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 555 AASSMVCHAIWLRNMLKHLQCPQVGPTKVFLDNKSAIALAKNPVCHKRSKHIDTRYHFIR 614
AA+S VCHAIWLRN+LK L PQV PTK+++DNKS IALAKNPV H RSKHI TRYH+IR
Sbjct: 1227 AATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSTIALAKNPVFHDRSKHIHTRYHYIR 1286
Query: 615 EHVKGGDIEVMYCKS 629
E + D+++ Y K+
Sbjct: 1287 ECISNKDVQMEYVKT 1301