BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0590.1
(164 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010252903.1 PREDICTED: photosystem I reaction center subunit ... 238 3e-78
XP_002264233.2 PREDICTED: photosystem I reaction center subunit ... 237 2e-77
CAN74757.1 hypothetical protein VITISV_026412 [Vitis vinifera] 234 9e-77
>XP_010252903.1 PREDICTED: photosystem I reaction center subunit V, chloroplastic
[Nelumbo nucifera]
Length = 169
Score = 238 bits (608), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 141/169 (83%), Gaps = 8/169 (4%)
Query: 3 STTLFSTPTFTPTIQKHQQL-PQS--FQGLRQIKPTDSFSTSLSKVSSKTSIISK---KP 56
++TLFS PTFTP+IQKH QL P FQGLR IK TDS L+K S +S S +
Sbjct: 2 ASTLFSAPTFTPSIQKHPQLTPHQSLFQGLRPIKSTDSSLFGLTKALSSSSKTSTKLSRN 61
Query: 57 TSKIGVIRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQ-VPEQNGMTHFEAGDTR 115
T K GV ++EL+PSLVISLSTGLSLFLGRFVFFNFQRENVAKQ +PEQNGMTHFEAGD R
Sbjct: 62 TPKFGV-KAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGMTHFEAGDVR 120
Query: 116 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 164
AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG
Sbjct: 121 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 169
>XP_002264233.2 PREDICTED: photosystem I reaction center subunit V, chloroplastic
[Vitis vinifera] CBI39855.3 unnamed protein product,
partial [Vitis vinifera]
Length = 194
Score = 237 bits (604), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 125/169 (73%), Positives = 141/169 (83%), Gaps = 13/169 (7%)
Query: 1 MASTTLFSTPTFTP---TIQKHQQLP-QSFQGLRQI-KPTDSFSTSLSKVSSKTSIISKK 55
MAS+ FS PTF+ T+QKH LP QSFQGLR + KPTD S ++ ++S++
Sbjct: 34 MASSAFFSAPTFSSAATTLQKH--LPHQSFQGLRPLSKPTD-LSLTIPRMSTR-----PI 85
Query: 56 PTSKIGVIRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGMTHFEAGDTR 115
P GV+R+EL+ SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD+R
Sbjct: 86 PKRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSR 145
Query: 116 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 164
AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG
Sbjct: 146 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 194
>CAN74757.1 hypothetical protein VITISV_026412 [Vitis vinifera]
Length = 161
Score = 234 bits (597), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 140/169 (82%), Gaps = 13/169 (7%)
Query: 1 MASTTLFSTPTFTP---TIQKHQQLP-QSFQGLRQI-KPTDSFSTSLSKVSSKTSIISKK 55
MAS+ FS PTF+ T+QKH LP Q FQGLR + KPTD S ++ ++S++
Sbjct: 1 MASSAFFSAPTFSSAATTLQKH--LPHQYFQGLRPLSKPTD-LSLTIPRMSTR-----PI 52
Query: 56 PTSKIGVIRSELSPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGMTHFEAGDTR 115
P GV+R+EL+ SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD+R
Sbjct: 53 PKRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSR 112
Query: 116 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 164
AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG
Sbjct: 113 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 161