BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0600.1
(257 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017609417.1 PREDICTED: uncharacterized protein LOC108455356 [... 182 3e-53
BAA22288.1 polyprotein [Oryza australiensis] 185 5e-50
XP_017604411.1 PREDICTED: uncharacterized protein LOC108451194 [... 174 7e-50
>XP_017609417.1 PREDICTED: uncharacterized protein LOC108455356 [Gossypium
arboreum]
Length = 289
Score = 182 bits (462), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 157/262 (59%), Gaps = 17/262 (6%)
Query: 6 SFNIRWLLEKEKLNGDNFIVWEKNLELALRSENKASILDTPLPIITEDSADEEIDSERSL 65
+ ++R +LE +KLNG NF+ W +NL + L+ E K + + PLP E A+ ++R +
Sbjct: 7 TLSLRSVLENDKLNGLNFLDWFRNLRIVLKQERKLYVNEQPLP--NEPPANAS-RADRDV 63
Query: 66 RKK----AEPVTCLMLATMEPNLQDKFIHMDAYTMIRQLTNLFQKKSRMERYETSKAILD 121
KK V CLMLATM P LQ + M AY MI L L+Q ++R +R++ SKA+
Sbjct: 64 YKKHLNDMVDVRCLMLATMNPELQKQHEDMVAYDMIDHLKELYQGQARQKRFDISKALFQ 123
Query: 122 MRLEKGKPVGPHVFKIISHFEKLARLGVDHGRDFATDIILHSLHNGFSQFRMHYNMNGWD 181
++ +G PVGPHV K+I + E L +LG ++ ATD+IL SL + +SQF +++NMN D
Sbjct: 124 CKMAEGSPVGPHVLKMIRYIESLFKLGFPLSQELATDVILQSLPDSYSQFVLNFNMNEID 183
Query: 182 KSLEELHAMLQTAEENIAVVEPKKEILMVKKEKGFKKKGKQRFKKKKMGK-----WKGKQ 236
K+L +L +ML+T E N+ V P K ILMV+ KG KGK + +KK GK KGK
Sbjct: 184 KTLPQLLSMLRTVEGNMKRVRP-KPILMVRNNKG---KGKAKVQKKPKGKGRPNSGKGKA 239
Query: 237 LAKNRSAQS-DSNCFYCNGIGH 257
K +S S + NCF+ GH
Sbjct: 240 ALKPKSGVSKEGNCFHYGVTGH 261
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 185 bits (470), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 149/261 (57%), Gaps = 7/261 (2%)
Query: 2 TTKESFNIRWLLEKEKLNGDNFIVWEKNLELALRSENKASILDTPLPIITEDSADEEIDS 61
TT +FN+R +LEKEKLNG NF+ W +NL + L+ E K +L+ P P E + +
Sbjct: 5 TTPSTFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYP--EELPNNATATA 62
Query: 62 ERSLRK---KAEPVTCLMLATMEPNLQDKFIHMDAYTMIRQLTNLFQKKSRMERYETSKA 118
R K A ++CLMLATM P LQ ++ DA+T I+ L +F+ ++R ER+ TSK+
Sbjct: 63 RRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKS 122
Query: 119 ILDMRLEKGKPVGPHVFKIISHFEKLARLGVDHGRDFATDIILHSLHNGFSQFRMHYNMN 178
+ RL +G PV PHV K+I + E L +LG ++ ATD+IL SL F F ++Y+MN
Sbjct: 123 LFACRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMN 182
Query: 179 GWDKSLEELHAMLQTAEENIAVVEPKKEILMVKKEKGFKKK--GKQRFKKKKMGKWKGKQ 236
D++L ELH ML+T EE+I ++ K K KK K++ ++ +
Sbjct: 183 NMDRTLAELHGMLKTVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNAK 242
Query: 237 LAKNRSAQSDSNCFYCNGIGH 257
K SA SD+ CFYC GH
Sbjct: 243 KGKKGSAASDAVCFYCKETGH 263
>XP_017604411.1 PREDICTED: uncharacterized protein LOC108451194 [Gossypium
arboreum]
Length = 303
Score = 174 bits (442), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 152/259 (58%), Gaps = 11/259 (4%)
Query: 6 SFNIRWLLEKEKLNGDNFIVWEKNLELALRSENKASILDTPLPIITEDSADE-EIDSERS 64
+ ++R +LEK+KLNG NF+ W +NL + L+ E K ++ LP +A + D+ +
Sbjct: 7 TLSLRLVLEKDKLNGLNFLDWFRNLRIVLKQERKLYFIEQLLPNEPPTNASRADRDAYKK 66
Query: 65 LRKKAEPVTCLMLATMEPNLQDKFIHMDAYTMIRQLTNLFQKKSRMERYETSKAILDMRL 124
V CLMLATM P L+ + M AY MI L L+Q+++R ER++ KA+ +L
Sbjct: 67 HLDNMVDVGCLMLATMNPELRKQHEDMVAYDMIEHLKELYQRQARQERFDIFKALFQCKL 126
Query: 125 EKGKPVGPHVFKIISHFEKLARLGVDHGRDFATDIILHSLHNGFSQFRMHYNMNGWDKSL 184
+G PVGPHV K+I + E L++LG ++ ATD+IL SL + + QF +++NMN DK+L
Sbjct: 127 AEGSPVGPHVLKMIGYIESLSKLGFLLSQELATDVILQSLLDSYRQFVLNFNMNEIDKTL 186
Query: 185 EELHAMLQTAEENIAVVEPKKEILMVKKEKGFKKKGKQRFKKKKMGK-----WKGKQLAK 239
+L ++L+TAE NI V P K IL+V+ G KG + + K GK KGK K
Sbjct: 187 PQLLSILRTAEGNIKKVGP-KPILIVRNNNG---KGNAKAQTKPKGKGRPNLGKGKAALK 242
Query: 240 NRSAQS-DSNCFYCNGIGH 257
+ S + NCF+C GH
Sbjct: 243 PKGGVSKEGNCFHCGVTGH 261