BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0610.1
(325 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010252902.1 PREDICTED: high mobility group B protein 10 [Nelu... 319 e-105
XP_006452770.1 hypothetical protein CICLE_v10008919mg [Citrus cl... 301 2e-98
XP_006474760.1 PREDICTED: high mobility group B protein 10 [Citr... 301 3e-98
>XP_010252902.1 PREDICTED: high mobility group B protein 10 [Nelumbo nucifera]
Length = 333
Score = 319 bits (817), Expect = e-105, Method: Compositional matrix adjust.
Identities = 157/271 (57%), Positives = 205/271 (75%), Gaps = 8/271 (2%)
Query: 52 YIAPEATYEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQVTSRGGLAK 111
Y +P A YE+V Q+A++F +TLK+LH SLGTK VPT+GGK+LDL++LFV+VTSRGGL K
Sbjct: 45 YPSPVAEYEEVVQNAEMFMETLKDLHRSLGTKFMVPTMGGKSLDLHRLFVEVTSRGGLEK 104
Query: 112 VIQNRQWKEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRRENKPF--SLTYVGNS 169
VI++R+W+++I +FNFP TITNASFVLRKYY+SLLHHYEQ+YF R+N P + V S
Sbjct: 105 VIRDRKWRDVITIFNFPSTITNASFVLRKYYISLLHHYEQLYFFRKNSPSIQASDSVPKS 164
Query: 170 PVGASSSLQTQCATNPENGTNTSDIPANSQICSGSRVSGTIDGKFDYGYLVTVTFGSEKL 229
PV + + + E T T + S++ +G RV+G IDGKFD GYLVTV+FG KL
Sbjct: 165 PVSCTGA----TPSTSEKQTTTDQLAGTSELSAGCRVTGIIDGKFDNGYLVTVSFGPNKL 220
Query: 230 KGVLYHVPHDSHVSANNTNDTLLPRRRNRKRSRRADSDPSRPNPNRSGYNFFFSENYASL 289
KGVLYHVP + +S ++N + +P RR+RKRSR A DPS P PNRSGYNFFF+E+YA L
Sbjct: 221 KGVLYHVPPELQMSL-SSNTSTVPPRRHRKRSRLALKDPSHPKPNRSGYNFFFAEHYARL 279
Query: 290 KSSHDDGQEKTISTKMGNMWSQLSEAEKQVF 320
K H GQEK IS K+G++WS+L+E+EKQV+
Sbjct: 280 KPLH-HGQEKAISKKIGHLWSKLTESEKQVY 309
>XP_006452770.1 hypothetical protein CICLE_v10008919mg [Citrus clementina]
ESR66010.1 hypothetical protein CICLE_v10008919mg
[Citrus clementina]
Length = 323
Score = 301 bits (772), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 193/271 (71%), Gaps = 9/271 (3%)
Query: 52 YIAPEATYEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQVTSRGGLAK 111
Y P A YE + Q +DLF TL+ H S G K VPT+GGKALDL++LFV+VTSRGGL K
Sbjct: 32 YPPPTAKYEDIAQSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGK 91
Query: 112 VIQNRQWKEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRRENKPFSLTYVGNSPV 171
VI++R+WKE++ VFNFP TIT+ASFVLRKYY+SLL+H+EQVY+ R+ P S + P
Sbjct: 92 VIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRKEAPSS-----SMPD 146
Query: 172 GASSSLQTQCATNPENGTNTSDI--PANSQICSGSRVSGTIDGKFDYGYLVTVTFGSEKL 229
S S + +PE G+ + + +S++ G VSG IDGKFD GYLVTV GSE+L
Sbjct: 147 AVSGSSLDNGSASPEEGSTINQLGGQGSSKLQIGCSVSGVIDGKFDNGYLVTVNLGSEQL 206
Query: 230 KGVLYHVPHDSHVSANNTNDTLLPRRRNRKRSRRADSDPSRPNPNRSGYNFFFSENYASL 289
KGVLYH+PH +VS ++N++ P R RKRSR A DPSRP NRSGYNFFF+E+YA L
Sbjct: 207 KGVLYHIPHAHNVS-QSSNNSAAPTHRRRKRSRLALRDPSRPKSNRSGYNFFFAEHYARL 265
Query: 290 KSSHDDGQEKTISTKMGNMWSQLSEAEKQVF 320
K H GQEK IS K+G +WS L+EAEKQV+
Sbjct: 266 K-PHYYGQEKAISKKIGVLWSNLTEAEKQVY 295
>XP_006474760.1 PREDICTED: high mobility group B protein 10 [Citrus sinensis]
Length = 326
Score = 301 bits (771), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 153/271 (56%), Positives = 192/271 (70%), Gaps = 9/271 (3%)
Query: 52 YIAPEATYEQVTQDADLFHKTLKNLHGSLGTKITVPTIGGKALDLYQLFVQVTSRGGLAK 111
Y P A YE + Q +DLF TL+ H S G K VPT+GGKALDL++LFV+VTSRGGL K
Sbjct: 35 YPPPTAKYEDIAQSSDLFWATLEAFHKSFGDKFKVPTVGGKALDLHRLFVEVTSRGGLGK 94
Query: 112 VIQNRQWKEIIAVFNFPVTITNASFVLRKYYMSLLHHYEQVYFRRENKPFSLTYVGNSPV 171
VI++R+WKE++ VFNFP TIT+ASFVLRKYY+SLL+H+EQVY+ R P S + P
Sbjct: 95 VIRDRRWKEVVVVFNFPTTITSASFVLRKYYLSLLYHFEQVYYFRREAPSS-----SMPD 149
Query: 172 GASSSLQTQCATNPENGTNTSDI--PANSQICSGSRVSGTIDGKFDYGYLVTVTFGSEKL 229
S S + +PE G+ + + +S++ G VSG IDGKFD GYLVTV GSE+L
Sbjct: 150 AVSGSSLDNGSASPEEGSTINQLGSQGSSKLQIGCSVSGVIDGKFDNGYLVTVNLGSEQL 209
Query: 230 KGVLYHVPHDSHVSANNTNDTLLPRRRNRKRSRRADSDPSRPNPNRSGYNFFFSENYASL 289
KGVLYH+PH +VS ++N++ P R RKRSR A DPSRP NRSGYNFFF+E+YA L
Sbjct: 210 KGVLYHIPHAHNVS-QSSNNSAAPTHRRRKRSRLALRDPSRPKSNRSGYNFFFAEHYARL 268
Query: 290 KSSHDDGQEKTISTKMGNMWSQLSEAEKQVF 320
K H GQEK IS K+G +WS L+EAEKQV+
Sbjct: 269 K-PHYYGQEKAISKKIGVLWSNLTEAEKQVY 298