BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0680.1
(120 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003631844.1 PREDICTED: nijmegen breakage syndrome 1 protein [... 59 1e-07
CAN75336.1 hypothetical protein VITISV_012698 [Vitis vinifera] 55 1e-06
>XP_003631844.1 PREDICTED: nijmegen breakage syndrome 1 protein [Vitis vinifera]
XP_010648864.1 PREDICTED: nijmegen breakage syndrome 1
protein [Vitis vinifera] CBI24024.3 unnamed protein
product, partial [Vitis vinifera]
Length = 595
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 48 PVLVSSSCSTDETMVADSDLEMDTAVTHGVHKNVRTKSIRTEDEAVSI-MVADSDAAIET 106
PVLVSSSCSTDET+VADSD E++TA + + TK + D I +VADSDA +ET
Sbjct: 330 PVLVSSSCSTDETVVADSDAEVETATSSHANSAAHTKEVFKYDSKGEISVVADSDAEVET 389
Query: 107 A 107
A
Sbjct: 390 A 390
>CAN75336.1 hypothetical protein VITISV_012698 [Vitis vinifera]
Length = 280
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 49 VLVSSSCSTDETMVADSDLEMDTAVTHGVHKNVRTKSIRTEDEAVSI-MVADSDAAIETA 107
+LVSSSCSTDET+VADSD E++TA + + TK + D I +VADSDA +ETA
Sbjct: 16 ILVSSSCSTDETVVADSDAEVETATSSHANSAAHTKEVFKYDSKGEISVVADSDAEVETA 75
Query: 108 WWTYNFAIA 116
+ A A
Sbjct: 76 TLIHANAAA 84