BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0900.1
(274 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY38433.1 hypothetical protein MANES_10G014000 [Manihot esculenta] 54 8e-05
>OAY38433.1 hypothetical protein MANES_10G014000 [Manihot esculenta]
Length = 516
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 46/249 (18%)
Query: 42 RPSSSGGRNPRPVTPNGRSTLSPVSKQPLRASRP----TVSSSGGQSSSPIPTT-PKEWP 96
RPSSSGG RP TP GR TL+ SK P R+S P T+ SS +S+ PTT P P
Sbjct: 91 RPSSSGGPGSRPGTPTGRPTLTTASK-PSRSSTPTSRTTLLSSKSVASATKPTTVPAAKP 149
Query: 97 TFPATS-EQPLRASRPSLSGSQSSSPQSPSEHLMLPATSNQPSRASRPPAPTSPATIPSS 155
T A P R+S PS S ++SS+P S +R+S P T+ ++ P++
Sbjct: 150 TASAVKPTIPTRSSTPSRSTARSSTP------------SRSTARSSTPSRSTARSSTPTA 197
Query: 156 KPAAPKGSSTSSMRSSTP--------SIQSITAPEKLSANLATSTPSSESSIQPSPRSS- 206
+P+ P STS R+STP S+ + +AP K +A++ + PS+ + P +S
Sbjct: 198 RPSIPPSKSTS--RASTPTRRPSTPSSVPTKSAPVKSTASVTKTMPSTATISAPPVKSIP 255
Query: 207 SLIKLDPATTRNP-PSSVNSQTIKSRQPEHSDM---------------PRKPVSASKGRS 250
S+ K P RNP PS NS T KSR + S+M P +P+SA++GR
Sbjct: 256 SVTKATPTIARNPVPSHGNSPTTKSRPWKPSEMPGFSLDTPPNLRTSLPERPLSATRGRP 315
Query: 251 GAPTAQSYS 259
GAP+++S S
Sbjct: 316 GAPSSRSSS 324