BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0920.1
(304 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002274030.1 PREDICTED: mucin-17 [Vitis vinifera] CBI25498.3 u... 65 3e-08
>XP_002274030.1 PREDICTED: mucin-17 [Vitis vinifera] CBI25498.3 unnamed protein
product, partial [Vitis vinifera]
Length = 545
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 111/214 (51%), Gaps = 54/214 (25%)
Query: 110 RPSLSGIKSSSPQSPNGHLMLPATPNQPSRASRPPAPTSPATIPSSKPAAPKGSST---- 165
RPS SG S P +P G L AT +R SRP PTS AT+ S+KP P SST
Sbjct: 177 RPSSSGGPGSRPATPTGRPTLTAT----TRPSRPATPTSRATLTSTKPTVPARSSTPVTR 232
Query: 166 SSMRSSTPSIQSITASEKLSADLATSPNAPARSSKPATQPALLSKPTAKPMEPTCRTSTP 225
S+ RSSTP+ + P+ PA SKP ++ PT R STP
Sbjct: 233 STARSSTPT---------------SRPSIPA------------SKPVSRAATPTRRPSTP 265
Query: 226 SSVSSIQPPP--RSSSLIKLDPATTRNP-PSSGNSRTIKSRQPEPSDM------------ 270
SSVS++ PP +SS+ K PAT+RNP PS G+S T+KSR +P +M
Sbjct: 266 SSVSNLSAPPIKSTSSVTKSGPATSRNPVPSRGSSPTVKSRPWKPLEMPGYSLDAPPNLR 325
Query: 271 ---PTKPVSASKGWSGAPTAQSYSHVSS-NGKSR 300
P +PVSAS+G AP A+S S ++ NG+ R
Sbjct: 326 TSAPERPVSASRGRPSAPIARSSSVDAAPNGRPR 359