BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g0950.1
(320 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002268645.1 PREDICTED: 60S acidic ribosomal protein P0 [Vitis... 496 e-175
XP_016705552.1 PREDICTED: 60S acidic ribosomal protein P0-like [... 495 e-175
XP_002276842.1 PREDICTED: 60S acidic ribosomal protein P0 [Vitis... 494 e-174
>XP_002268645.1 PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
Length = 320
Score = 496 bits (1276), Expect = e-175, Method: Compositional matrix adjust.
Identities = 246/278 (88%), Positives = 261/278 (93%), Gaps = 1/278 (0%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKI YD+KLC LLDEY+QIL+ ADNVGSNQLQ IRKGLRGDSVVLMGKNTM+KRS+R
Sbjct: 8 ADKKIAYDQKLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIR 67
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
LHAEKTGN AFLNLI LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDV+VP
Sbjct: 68 LHAEKTGNTAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVP 127
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELIKKGDKVGSSEA LLAKLGIRPFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV+SV+DNGSV++ EVLDLTEEDL+ KFAAGVSMVTSLSLAISYPTLAAAPHMFIN
Sbjct: 188 YGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAAPHMFINA 247
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKFVVA-APV 288
YK VL+VAVAT+YSFP+ADKVKEYLKDPSKF VA APV
Sbjct: 248 YKNVLAVAVATEYSFPQADKVKEYLKDPSKFAVATAPV 285
>XP_016705552.1 PREDICTED: 60S acidic ribosomal protein P0-like [Gossypium
hirsutum]
Length = 321
Score = 495 bits (1274), Expect = e-175, Method: Compositional matrix adjust.
Identities = 245/282 (86%), Positives = 259/282 (91%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKI YD KLC LLDEYTQIL+ ADNVGSNQLQ IRKGLRGDSVVLMGKNTM+KRSVR
Sbjct: 8 ADKKIAYDAKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVR 67
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
+HAEKTGN+AFLNLI LL GNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP
Sbjct: 68 MHAEKTGNQAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 127
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELIKKG+KVGSSEA LLAKLGIRPFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFS 187
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV+SV+DNGSV++ EVLDLTEEDL+ KFA GVSMVT+LSLAISYPTLAAAPHMFIN
Sbjct: 188 YGLVVLSVYDNGSVFSPEVLDLTEEDLIEKFATGVSMVTALSLAISYPTLAAAPHMFINA 247
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKFVVAAPVVAASA 293
YK VLSVAVAT+YSFP+ADKVKEYL DPSKF VA P VA A
Sbjct: 248 YKNVLSVAVATEYSFPQADKVKEYLADPSKFAVAVPAVATDA 289
>XP_002276842.1 PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
Length = 320
Score = 494 bits (1273), Expect = e-174, Method: Compositional matrix adjust.
Identities = 241/271 (88%), Positives = 257/271 (94%)
Query: 12 AGKKIVYDKKLCTLLDEYTQILVVEADNVGSNQLQTIRKGLRGDSVVLMGKNTMIKRSVR 71
A KKI YD+KLC LLDEYTQIL+ ADNVGSNQLQ IRKGLRGDSVVLMGKNTM+KRS+R
Sbjct: 8 ADKKIAYDQKLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIR 67
Query: 72 LHAEKTGNKAFLNLIQLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 131
LHAEKTGN+AFLNLI LLVGNVGLIFT+GDLKEVSEEVAKYKVGAPARVGLVAPIDV+VP
Sbjct: 68 LHAEKTGNQAFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVP 127
Query: 132 PGNTGLDPSQTSFFQVLNIPTKINKGSVEISAPVELIKKGDKVGSSEATLLAKLGIRPFS 191
PGNTGLDPSQTSFFQVLNIPTKINKG+VEI PVELI+KGDKVGSSEA LLAKLGIRPFS
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFS 187
Query: 192 YGLVVVSVFDNGSVYNREVLDLTEEDLMGKFAAGVSMVTSLSLAISYPTLAAAPHMFINT 251
YGLVV+SV+DNGSV++ EVLDLTEEDLM KFAAGVSMVTSLSLAISYPTLAAAPHMF+N
Sbjct: 188 YGLVVLSVYDNGSVFSPEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPTLAAAPHMFVNA 247
Query: 252 YKKVLSVAVATDYSFPKADKVKEYLKDPSKF 282
YK VLSVAVATDYSFP+ADKVKE+LKDPSKF
Sbjct: 248 YKNVLSVAVATDYSFPQADKVKEFLKDPSKF 278