BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1030.1
(285 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010923104.1 PREDICTED: eukaryotic translation initiation fact... 506 e-180
XP_008785406.1 PREDICTED: eukaryotic translation initiation fact... 502 e-179
XP_010275422.1 PREDICTED: eukaryotic translation initiation fact... 498 e-177
>XP_010923104.1 PREDICTED: eukaryotic translation initiation factor 3 subunit F
isoform X2 [Elaeis guineensis] XP_010923105.1 PREDICTED:
eukaryotic translation initiation factor 3 subunit F
isoform X2 [Elaeis guineensis]
Length = 285
Score = 506 bits (1304), Expect = e-180, Method: Compositional matrix adjust.
Identities = 237/285 (83%), Positives = 262/285 (91%)
Query: 1 MTGGDQTVLQFFPLSTSLSTKVPPVVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVEI 60
M QTVLQFFP +TSLS +V PVV+FNICDCYVRRPDQA+RVIGTLLGSV PDGTVEI
Sbjct: 1 MAASKQTVLQFFPSTTSLSARVHPVVLFNICDCYVRRPDQADRVIGTLLGSVSPDGTVEI 60
Query: 61 RNSYAVPHNESSDQVALDIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYS 120
+NSYAVPHNES+DQVALDI+YHHNM +SHQKVNPKEVIVGWYSTGFGVSGGS LIHEFYS
Sbjct: 61 KNSYAVPHNESADQVALDIDYHHNMFMSHQKVNPKEVIVGWYSTGFGVSGGSTLIHEFYS 120
Query: 121 REVQNPVHLTVDTGFKNGEASIKAFVSINLTLGDRQLAAQFQEIPLDLRMLEAERVGFDI 180
REV NPVHLTVDTGF+NGEASIKA+VS+NL+LGDRQLAAQFQEIPLD+RM+EAERVGFDI
Sbjct: 121 REVSNPVHLTVDTGFQNGEASIKAYVSVNLSLGDRQLAAQFQEIPLDMRMIEAERVGFDI 180
Query: 181 LKSTMVNKLPNNLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIP 240
LK MV+KLPN+LEGM+ASMERLLALIDDV KYVDDVVE RV PDNN+G+ I DT++S+P
Sbjct: 181 LKMAMVDKLPNDLEGMEASMERLLALIDDVYKYVDDVVEGRVTPDNNIGRFIADTLSSVP 240
Query: 241 KISPGGFDKLINDSIQDNLLLLYLSSLTRTQLSLAEKLNTAAQIL 285
K+SP FDKL ND IQDNL L+YLSSLTRTQLS+AEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLFNDRIQDNLALVYLSSLTRTQLSVAEKLNTAAQIL 285
>XP_008785406.1 PREDICTED: eukaryotic translation initiation factor 3 subunit F
[Phoenix dactylifera]
Length = 285
Score = 502 bits (1293), Expect = e-179, Method: Compositional matrix adjust.
Identities = 235/285 (82%), Positives = 263/285 (92%)
Query: 1 MTGGDQTVLQFFPLSTSLSTKVPPVVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVEI 60
M G QTVLQFFP +TSLS +V PVV+FNICDCYVRRPDQA+RVIGTLLGSV PDGTVEI
Sbjct: 1 MAAGKQTVLQFFPSTTSLSARVHPVVLFNICDCYVRRPDQADRVIGTLLGSVSPDGTVEI 60
Query: 61 RNSYAVPHNESSDQVALDIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYS 120
+NSYAVPHNES+DQVALDI+YHHNM +SHQKVNPKEVIVGWYSTGFGVSGGS LIH+FYS
Sbjct: 61 KNSYAVPHNESADQVALDIDYHHNMFMSHQKVNPKEVIVGWYSTGFGVSGGSTLIHDFYS 120
Query: 121 REVQNPVHLTVDTGFKNGEASIKAFVSINLTLGDRQLAAQFQEIPLDLRMLEAERVGFDI 180
REV NPVHLTVDTGF+NGEASIKA+VS+NL+LGDRQLAAQFQEIPLDL+M+EAERVGFDI
Sbjct: 121 REVSNPVHLTVDTGFQNGEASIKAYVSVNLSLGDRQLAAQFQEIPLDLQMIEAERVGFDI 180
Query: 181 LKSTMVNKLPNNLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIP 240
LK ++V+KLPN+LEGM+ASMERLLALIDDV KYVDDVVE RV PDNN+G+ I D ++S+P
Sbjct: 181 LKMSLVDKLPNDLEGMEASMERLLALIDDVYKYVDDVVEGRVTPDNNIGRFIADALSSVP 240
Query: 241 KISPGGFDKLINDSIQDNLLLLYLSSLTRTQLSLAEKLNTAAQIL 285
K+SP FDKL ND IQDNL L+YLSSLTRTQLS+AEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLFNDRIQDNLALVYLSSLTRTQLSVAEKLNTAAQIL 285
>XP_010275422.1 PREDICTED: eukaryotic translation initiation factor 3 subunit
F-like [Nelumbo nucifera]
Length = 285
Score = 498 bits (1282), Expect = e-177, Method: Compositional matrix adjust.
Identities = 247/285 (86%), Positives = 268/285 (94%)
Query: 1 MTGGDQTVLQFFPLSTSLSTKVPPVVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVEI 60
M + TVLQFFP STSLS KV PVVIFNICDCYVRRPDQAERVIGTLLGS+ PDGTVEI
Sbjct: 1 MASREPTVLQFFPSSTSLSAKVHPVVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVEI 60
Query: 61 RNSYAVPHNESSDQVALDIEYHHNMLLSHQKVNPKEVIVGWYSTGFGVSGGSALIHEFYS 120
RNSYAVPHNESSDQVALDI+YHHNML SHQKVNPKEVIVGWYSTGFGVSGGSALIH+FYS
Sbjct: 61 RNSYAVPHNESSDQVALDIDYHHNMLTSHQKVNPKEVIVGWYSTGFGVSGGSALIHDFYS 120
Query: 121 REVQNPVHLTVDTGFKNGEASIKAFVSINLTLGDRQLAAQFQEIPLDLRMLEAERVGFDI 180
REV NPVHLTVDTGF+NGEASIKAFVS+NL+LGDRQ+AAQFQEIPLDLRM+EAERVGFDI
Sbjct: 121 REVANPVHLTVDTGFRNGEASIKAFVSVNLSLGDRQIAAQFQEIPLDLRMIEAERVGFDI 180
Query: 181 LKSTMVNKLPNNLEGMQASMERLLALIDDVSKYVDDVVEQRVAPDNNVGKSILDTVASIP 240
LK+TMV+K+PN+LEGM+ASMERLLALIDDV KYVD+VVE+RVAPDN +G+ I DTV SIP
Sbjct: 181 LKTTMVDKVPNDLEGMEASMERLLALIDDVYKYVDNVVERRVAPDNKIGRFISDTVNSIP 240
Query: 241 KISPGGFDKLINDSIQDNLLLLYLSSLTRTQLSLAEKLNTAAQIL 285
KISP FDKL+NDS+QD+LLLLYLSSLTRTQLSLAEKLNTAAQIL
Sbjct: 241 KISPAAFDKLVNDSLQDHLLLLYLSSLTRTQLSLAEKLNTAAQIL 285