BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1410.1
(451 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACY72569.1 unknown [Oryza sativa Japonica Group] 530 e-172
AAB82754.1 retrofit [Oryza longistaminata] 528 e-172
KHN17953.1 Retrovirus-related Pol polyprotein from transposon TN... 508 e-165
>ACY72569.1 unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 530 bits (1364), Expect = e-172, Method: Compositional matrix adjust.
Identities = 252/469 (53%), Positives = 324/469 (69%), Gaps = 32/469 (6%)
Query: 1 MNIIGCKWVFRIKKNVDGTISRYKARLVARGFNQVEGIDYEDTFSPVIKSVSIRIILSLA 60
N+IGCKWV++IK+ DGT+ RYKARLVA+GF Q GIDYEDTFSPV+K+ +IRIILS+A
Sbjct: 966 QNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIA 1025
Query: 61 LSKGWVLRQLDIKNAFLNGFLKEEVYMCQPPGFIDSDKPHHVCKLQRSLYGLKQAPRAWF 120
+S+GW LRQLD++NAFL+GFL+EEVYM QPPGF KP++VCKL ++LYGLKQAPRAW+
Sbjct: 1026 VSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWY 1085
Query: 121 ERLSTFLLSHGFLASQTDTSLFFKVTSSHAIYILIYVDDIIITGSDPSLVQSTIDTLSSE 180
RLS L+ GF AS+ DTSLFF +++L+YVDDIII S + + L+ E
Sbjct: 1086 SRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKE 1145
Query: 181 FAISDLGSLNYFLGIEVLPSSNGLLLSQRQYISNLLLKTKMTEAKSVSTPMATNCVLKRN 240
FA+ DLG L+YFLGIEV NG++L+Q +Y ++LL + M+ K VSTP++ + L
Sbjct: 1146 FALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLY 1205
Query: 241 VGDPLSENDTKLYRSTVGALQYATITRPDISFSVNKVCQFLQNPTQDHWYA--------- 291
G PL ND YRS VGALQY T+TRPDI++SVNKVCQFL PT DHW A
Sbjct: 1206 EGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLN 1265
Query: 292 -----------------------DWAGCPDDRKSTGGILVFMGSNLISWCSKKQTTVARS 328
DWAG DDRKSTGG VF+GSNL+SW ++KQ TV+RS
Sbjct: 1266 QCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRS 1325
Query: 329 STEAEYKAIADATSELIWVQSLFHELGIITKSCPLLWCDNLGATYLTSNPIFHHRMKHVE 388
STEAEYKA+A+ T+ELIWVQ+L ELGI + +WCDNLGA YL++NP+FH R KH+E
Sbjct: 1326 STEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIE 1385
Query: 389 IAYHFVRDMVKHQKLQVRHISTHDQLADILTKPLSLSRFSALRSKLNIV 437
+ YHFVR+ V + L++ + + DQ+AD TK LS+ + LN+
Sbjct: 1386 VDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSVRLLEHFKHNLNLT 1434
>AAB82754.1 retrofit [Oryza longistaminata]
Length = 1445
Score = 528 bits (1361), Expect = e-172, Method: Compositional matrix adjust.
Identities = 253/468 (54%), Positives = 323/468 (69%), Gaps = 32/468 (6%)
Query: 2 NIIGCKWVFRIKKNVDGTISRYKARLVARGFNQVEGIDYEDTFSPVIKSVSIRIILSLAL 61
NIIGCKWV++IK+ DGT+ RYKARLVA+GF Q GIDYEDTFSPV+K+ +IRIILS+A+
Sbjct: 976 NIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAV 1035
Query: 62 SKGWVLRQLDIKNAFLNGFLKEEVYMCQPPGFIDSDKPHHVCKLQRSLYGLKQAPRAWFE 121
S+GW LRQLD++NAFL+GFL+EEVYM QPPGF S KP +VCKL ++LYGLKQAPRAW+
Sbjct: 1036 SRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYS 1095
Query: 122 RLSTFLLSHGFLASQTDTSLFFKVTSSHAIYILIYVDDIIITGSDPSLVQSTIDTLSSEF 181
RLS L+ GF AS+ DTSLFF +++L+YVDDII+ S + + L+ EF
Sbjct: 1096 RLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEF 1155
Query: 182 AISDLGSLNYFLGIEVLPSSNGLLLSQRQYISNLLLKTKMTEAKSVSTPMATNCVLKRNV 241
A+ DLG L+YFLGIEV SNG++L+Q +Y ++LL + M+ K VSTP++ + L
Sbjct: 1156 ALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYE 1215
Query: 242 GDPLSENDTKLYRSTVGALQYATITRPDISFSVNKVCQFLQNPTQDHWYA---------- 291
G PL ND YRS VGALQY T+TRPDI++SVNKVCQFL PT HW A
Sbjct: 1216 GSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQ 1275
Query: 292 ----------------------DWAGCPDDRKSTGGILVFMGSNLISWCSKKQTTVARSS 329
DWAG DDRKSTGG VF+GSNL+SW ++KQ TV+RSS
Sbjct: 1276 CTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSS 1335
Query: 330 TEAEYKAIADATSELIWVQSLFHELGIITKSCPLLWCDNLGATYLTSNPIFHHRMKHVEI 389
TEAEYKA+A+ T+ELIWVQ+L ELGI + +WCDNLGA YL++NP+FH R KH+E+
Sbjct: 1336 TEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEV 1395
Query: 390 AYHFVRDMVKHQKLQVRHISTHDQLADILTKPLSLSRFSALRSKLNIV 437
YHFVR+ V + L++ + + DQ+AD TK LS + LN+
Sbjct: 1396 DYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSACLLENFKHNLNLA 1443
>KHN17953.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine
soja]
Length = 1294
Score = 508 bits (1308), Expect = e-165, Method: Compositional matrix adjust.
Identities = 244/458 (53%), Positives = 323/458 (70%), Gaps = 34/458 (7%)
Query: 2 NIIGCKWVFRIKKNVDGTISRYKARLVARGFNQVEGIDYEDTFSPVIKSVSIRIILSLAL 61
N++GCKWVFRIK+N DG+I RYKARLVA+GF+Q G DY +TFSPV+K V+IRI+L+LA+
Sbjct: 815 NLVGCKWVFRIKRNPDGSIDRYKARLVAKGFHQRSGWDYTETFSPVVKPVTIRIVLTLAV 874
Query: 62 SKGWVLRQLDIKNAFLNGFLKEEVYMCQPPGFIDSDKPHHVCKLQRSLYGLKQAPRAWFE 121
+GW +RQLD+ NAFL G LKEEV+M QPPGF++ + P HVC+L+++LYGLKQAPRAW+
Sbjct: 875 RQGWPIRQLDVNNAFLQGTLKEEVFMIQPPGFVNKNFPDHVCRLKKALYGLKQAPRAWYT 934
Query: 122 RLSTFLLSHGFLASQTDTSLFFKVTSSHAIYILIYVDDIIITGSDPSLVQSTIDTLSSEF 181
L FL S GF+ S D SLF +Y+L+YVDDII+TG+ + + I TL++ F
Sbjct: 935 ELRIFLFSLGFVNSTADASLFIYQKPEVTLYLLVYVDDIIMTGNSSAELSKLIATLAARF 994
Query: 182 AISDLGSLNYFLGIEVLPSSNGLLLSQRQYISNLLLKTKMTEAKSVSTPMATNCVLKRNV 241
++ DLG L+YFLG+EV+PS+ G+ LSQR+YI +LL K+ MT K STP++ + L ++
Sbjct: 995 SLKDLGCLSYFLGVEVIPSAAGMFLSQRKYIIDLLHKSGMTNTKPASTPLSASVQLLKDS 1054
Query: 242 GDPLSENDTKLYRSTVGALQYATITRPDISFSVNKVCQFLQNPTQDHWYA---------- 291
GD L + YR+ VG+LQY ++TRPDI+FS NK+ QF+QNP HW A
Sbjct: 1055 GDLLPSPNE--YRTLVGSLQYLSLTRPDIAFSTNKLAQFMQNPRTAHWSALKRVLRYLAG 1112
Query: 292 ----------------------DWAGCPDDRKSTGGILVFMGSNLISWCSKKQTTVARSS 329
DWAG DD ST G L+++G+ ISW S+KQ +VARSS
Sbjct: 1113 SCDKGVFISATAPLTFHAYSDADWAGDKDDYVSTTGYLLYLGNTPISWSSRKQRSVARSS 1172
Query: 330 TEAEYKAIADATSELIWVQSLFHELGIITKSCPLLWCDNLGATYLTSNPIFHHRMKHVEI 389
TEAEYKA+AD SEL+WV SLF ELG + + P+++CDNLGAT L++NP+FH RMKH+ +
Sbjct: 1173 TEAEYKALADTASELLWVLSLFTELGHMPTANPVIYCDNLGATNLSANPVFHSRMKHIAL 1232
Query: 390 AYHFVRDMVKHQKLQVRHISTHDQLADILTKPLSLSRF 427
AYHFVR+ V+H K +V +ST DQLADILTKPL RF
Sbjct: 1233 AYHFVREHVQHGKFRVSFVSTDDQLADILTKPLLRPRF 1270