BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1710.1
(99 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAF71156.1 polygalacturonase B, partial [Actinidia chinensis] AA... 136 3e-39
AAF71155.1 polygalacturonase A, partial [Actinidia chinensis] 135 1e-38
AAF71154.1 polygalacturonase A, partial [Actinidia chinensis] 135 1e-38
>AAF71156.1 polygalacturonase B, partial [Actinidia chinensis] AAF71157.1
polygalacturonase B, partial [Actinidia chinensis]
Length = 164
Score = 136 bits (343), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 80/96 (83%)
Query: 1 MRNVSNPIIIDQNYCDQKDPCNEQESSVHVYDVLYKNIEGTSASDVAMSFDCSKSYPCRG 60
M NV+NPIIIDQNYCDQ PC +Q S+V V +++Y+NI+GTSASDVA++FDCSK +PC+G
Sbjct: 69 MHNVANPIIIDQNYCDQNKPCPQQSSAVQVKNIVYQNIKGTSASDVAVTFDCSKRFPCQG 128
Query: 61 IVLEDINLVGQQGKEAKAVCNNVKLTKTGKITPRCP 96
IVLE ++L + G AKA+CNNVKL++TG ++P CP
Sbjct: 129 IVLEGVDLEREGGAAAKALCNNVKLSETGVVSPHCP 164
>AAF71155.1 polygalacturonase A, partial [Actinidia chinensis]
Length = 171
Score = 135 bits (340), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 78/96 (81%)
Query: 1 MRNVSNPIIIDQNYCDQKDPCNEQESSVHVYDVLYKNIEGTSASDVAMSFDCSKSYPCRG 60
M NV NPIIIDQNYCDQ PC EQ S+V V ++ YKNI+GT AS+VA++FDCSK +PC+G
Sbjct: 69 MHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNIFYKNIKGTCASNVAITFDCSKRFPCQG 128
Query: 61 IVLEDINLVGQQGKEAKAVCNNVKLTKTGKITPRCP 96
IVLED++L + G AKA+CNNV+L++TG ++P CP
Sbjct: 129 IVLEDVDLEIEGGAAAKALCNNVELSETGVVSPHCP 164
>AAF71154.1 polygalacturonase A, partial [Actinidia chinensis]
Length = 171
Score = 135 bits (339), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 78/96 (81%)
Query: 1 MRNVSNPIIIDQNYCDQKDPCNEQESSVHVYDVLYKNIEGTSASDVAMSFDCSKSYPCRG 60
M NV NPIIIDQNYCDQ PC EQ S+V V ++ YKNI+GT AS+VA++FDCSK +PC+G
Sbjct: 69 MHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNIFYKNIKGTCASNVAITFDCSKRFPCQG 128
Query: 61 IVLEDINLVGQQGKEAKAVCNNVKLTKTGKITPRCP 96
IVLED++L + G AKA+CNNV+L++TG ++P CP
Sbjct: 129 IVLEDVDLEIEGGAAAKALCNNVELSETGVVSPHCP 164