BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g1780.1
(548 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010651288.1 PREDICTED: pentatricopeptide repeat-containing pr... 595 0.0
CAN80267.1 hypothetical protein VITISV_027683 [Vitis vinifera] 597 0.0
XP_002283117.1 PREDICTED: pentatricopeptide repeat-containing pr... 598 0.0
>XP_010651288.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520
isoform X2 [Vitis vinifera]
Length = 407
Score = 595 bits (1534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 274/382 (71%), Positives = 326/382 (85%), Gaps = 1/382 (0%)
Query: 1 MLVRGPEPNAYTLVSALSACANLAALHQGRWIHAYIHKAKIKMNEQLLASLIDMYSKCGE 60
ML GP PN +TL SAL+ACANL AL QGRWIH YI K++IKMNE+LLASL+DMY+KCGE
Sbjct: 23 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 82
Query: 61 IEFASEVFYHENSLKQTIFPWNALLGGFAMNGCSTEAVNLFENMILTNITPNKVTFISLL 120
I+FA++VF+ E LK ++PWNA++GG+AM+G S EA++LFE M + ++PNKVTF++LL
Sbjct: 83 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 142
Query: 121 NACSHGNLVEEGRKYFKSMMSSYGVEPEIEHYGCMVDLLGRSGLLKEAEEIILTMPVPPD 180
NACSHG LVEEGR YFKSM SSYG+EPEIEHYGCMVDLLGRSGLLKEAEE + MP+ PD
Sbjct: 143 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 202
Query: 181 TIIWGALLGACRKHKDTEKGERVGNIIRELDPKNVGCNVLLANMYSSSGRWNEAKVIRDE 240
IWGALLGACR HKD E+G+R+G II+ELD ++GC+VLLAN+YS+SG+W+EAK +R +
Sbjct: 203 ATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQK 262
Query: 241 IVINGEKKTPGCTSIEINGIFHQFLVGDRSHPQTKQIYSFLDEMMTRLKIAGYVPEVGEV 300
I ++G KKTPGC+SIE+NG+FHQFLVGDRSHPQTKQ+Y FLDEM T+LK AGYVPE GEV
Sbjct: 263 IEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEV 322
Query: 301 LLDINDEEDKETALSIHSEKLAIAFGLINTAQGTSIRIVKNLRVCGDCHQATKLISKVYD 360
LLDI+DEEDKETALS HSEKLAIAFGLINT GT+IRIVKNLRVC DCH+ATK ISKVY
Sbjct: 323 LLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYK 382
Query: 361 REIIVRDRLRLAVESRRGICCC 382
REIIVRDR+R + G C C
Sbjct: 383 REIIVRDRIRYH-HFKDGFCSC 403
>CAN80267.1 hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 597 bits (1538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 274/382 (71%), Positives = 326/382 (85%), Gaps = 1/382 (0%)
Query: 1 MLVRGPEPNAYTLVSALSACANLAALHQGRWIHAYIHKAKIKMNEQLLASLIDMYSKCGE 60
ML GP PN +TL SAL+ACANL AL QGRWIH YI K++IKMNE+LLASL+DMY+KCGE
Sbjct: 155 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 214
Query: 61 IEFASEVFYHENSLKQTIFPWNALLGGFAMNGCSTEAVNLFENMILTNITPNKVTFISLL 120
I+FA++VF+ E LK ++PWNA++GG+AM+G S EA++LFE M + ++PNKVTF++LL
Sbjct: 215 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 274
Query: 121 NACSHGNLVEEGRKYFKSMMSSYGVEPEIEHYGCMVDLLGRSGLLKEAEEIILTMPVPPD 180
NACSHG LVEEGR YFKSM SSYG+EPEIEHYGCMVDLLGRSGLLKEAEE + MP+ PD
Sbjct: 275 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 334
Query: 181 TIIWGALLGACRKHKDTEKGERVGNIIRELDPKNVGCNVLLANMYSSSGRWNEAKVIRDE 240
IWGALLGACR HKD E+G+R+G II+ELD ++GC+VLLAN+YS+SG+W+EAK +R +
Sbjct: 335 ATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQK 394
Query: 241 IVINGEKKTPGCTSIEINGIFHQFLVGDRSHPQTKQIYSFLDEMMTRLKIAGYVPEVGEV 300
I ++G KKTPGC+SIE+NG+FHQFLVGDRSHPQTKQ+Y FLDEM T+LK AGYVPE GEV
Sbjct: 395 IEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEV 454
Query: 301 LLDINDEEDKETALSIHSEKLAIAFGLINTAQGTSIRIVKNLRVCGDCHQATKLISKVYD 360
LLDI+DEEDKETALS HSEKLAIAFGLINT GT+IRIVKNLRVC DCH+ATK ISKVY
Sbjct: 455 LLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYK 514
Query: 361 REIIVRDRLRLAVESRRGICCC 382
REIIVRDR+R + G C C
Sbjct: 515 REIIVRDRIRYH-HFKDGFCSC 535
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 68/264 (25%)
Query: 3 VRGPEPNAYTLVSALSACANLAALHQGRWIHAYIHKAKIKMNEQLLASLIDMYSKCGEIE 62
V G PN YT V AC N + +G I + K ++ N + ++I MY+ G ++
Sbjct: 25 VSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVD 84
Query: 63 FASEVFYHENSLKQTIFPWNALLGGFAMNG------------------------------ 92
A VF + SL Q ++ WN ++GG+ +G
Sbjct: 85 EARRVF--DWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQV 142
Query: 93 -CSTEAVNLFENMILTNITPNKVTFISLLNACSHGNLVEEGR-----------KYFKSMM 140
C EA++LF M+ T PN+ T S L AC++ +++GR K + ++
Sbjct: 143 GCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLL 202
Query: 141 SS---------------------YGVEPEIEHYGCMVDLLGRSGLLKEAEEIILTM---P 176
+S YG++ ++ + M+ G KEA ++ M
Sbjct: 203 ASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEK 262
Query: 177 VPPDTIIWGALLGACRKHKDTEKG 200
V P+ + + ALL AC K E+G
Sbjct: 263 VSPNKVTFVALLNACSHGKLVEEG 286
>XP_002283117.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520
isoform X1 [Vitis vinifera]
Length = 624
Score = 598 bits (1541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 274/382 (71%), Positives = 326/382 (85%), Gaps = 1/382 (0%)
Query: 1 MLVRGPEPNAYTLVSALSACANLAALHQGRWIHAYIHKAKIKMNEQLLASLIDMYSKCGE 60
ML GP PN +TL SAL+ACANL AL QGRWIH YI K++IKMNE+LLASL+DMY+KCGE
Sbjct: 240 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 299
Query: 61 IEFASEVFYHENSLKQTIFPWNALLGGFAMNGCSTEAVNLFENMILTNITPNKVTFISLL 120
I+FA++VF+ E LK ++PWNA++GG+AM+G S EA++LFE M + ++PNKVTF++LL
Sbjct: 300 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 359
Query: 121 NACSHGNLVEEGRKYFKSMMSSYGVEPEIEHYGCMVDLLGRSGLLKEAEEIILTMPVPPD 180
NACSHG LVEEGR YFKSM SSYG+EPEIEHYGCMVDLLGRSGLLKEAEE + MP+ PD
Sbjct: 360 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 419
Query: 181 TIIWGALLGACRKHKDTEKGERVGNIIRELDPKNVGCNVLLANMYSSSGRWNEAKVIRDE 240
IWGALLGACR HKD E+G+R+G II+ELD ++GC+VLLAN+YS+SG+W+EAK +R +
Sbjct: 420 ATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQK 479
Query: 241 IVINGEKKTPGCTSIEINGIFHQFLVGDRSHPQTKQIYSFLDEMMTRLKIAGYVPEVGEV 300
I ++G KKTPGC+SIE+NG+FHQFLVGDRSHPQTKQ+Y FLDEM T+LK AGYVPE GEV
Sbjct: 480 IEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEV 539
Query: 301 LLDINDEEDKETALSIHSEKLAIAFGLINTAQGTSIRIVKNLRVCGDCHQATKLISKVYD 360
LLDI+DEEDKETALS HSEKLAIAFGLINT GT+IRIVKNLRVC DCH+ATK ISKVY
Sbjct: 540 LLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYK 599
Query: 361 REIIVRDRLRLAVESRRGICCC 382
REIIVRDR+R + G C C
Sbjct: 600 REIIVRDRIRYH-HFKDGFCSC 620
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 72/266 (27%)
Query: 3 VRGPEPNAYTLVSALSACANLAALHQGRWIHAYIHKAKIKMNEQLLAS--LIDMYSKCGE 60
V G PN YT V AC N + +G I +H KI + L + +I MY+ G
Sbjct: 110 VSGFLPNRYTFVFVFKACGNGLGVLEGEQIR--VHAIKIGLESNLFVTNAMIRMYANWGL 167
Query: 61 IEFASEVFYHENSLKQTIFPWNALLGGFAMNG---------------------------- 92
++ A VF + SL Q ++ WN ++GG+ +G
Sbjct: 168 VDEARRVF--DWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYV 225
Query: 93 ---CSTEAVNLFENMILTNITPNKVTFISLLNACSHGNLVEEGR-----------KYFKS 138
C EA++LF M+ T PN+ T S L AC++ +++GR K +
Sbjct: 226 QVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNER 285
Query: 139 MMSS---------------------YGVEPEIEHYGCMVDLLGRSGLLKEAEEIILTM-- 175
+++S YG++ ++ + M+ G KEA ++ M
Sbjct: 286 LLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKV 345
Query: 176 -PVPPDTIIWGALLGACRKHKDTEKG 200
V P+ + + ALL AC K E+G
Sbjct: 346 EKVSPNKVTFVALLNACSHGKLVEEG 371