BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2120.1
(752 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP44533.1 Retrovirus-related Pol polyprotein from transposon TN... 786 0.0
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TN... 786 0.0
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TN... 785 0.0
>KYP44533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/706 (56%), Positives = 508/706 (71%), Gaps = 27/706 (3%)
Query: 2 DKKVLFLIYQGIDGPTFEKVSEAKSSQEAWNILKNSFRGVDKVVKVRLQILRGEFEKLSM 61
DKK L LIYQG+D TFEK+S K+++EAW LK S++G D+V KVRLQ LRGEFE L M
Sbjct: 66 DKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHM 125
Query: 62 NEGELISDYISRVLSNVNKMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVIEESKDLESM 121
EGEL+SDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE+KDLE+M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAM 185
Query: 122 TVDELTGTLQIHEQRVNRNSASTSNYSVDQVLQAKLTLEEKQYAPQRERDYKSYGRDYDN 181
++++L G+LQ +E+ V+QV +A + +++ A + R +SY ++
Sbjct: 186 SIEQLLGSLQAYEE-----KKKKKEEIVEQVFKAHVDSRKEENAHNQSR--RSYSQEQGR 238
Query: 182 SRSEFGSQRGR---NFFNRGRT-NEPRERENFTRPYNRQGRDKRNIECYNCHKLGHYSNE 237
R+ +G +GR N RG + N R R N Y DK I+CYNC+K GHY++E
Sbjct: 239 GRA-YGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNCNKFGHYASE 292
Query: 238 CWYNKKNEVREDANLVENDVEINVDPTLLFSCDGLDESQTNTWYFDTGASNLICGKRELF 297
C KN+V E AN E + D TLL + G D+ + N WY D+GASN +CGKR +F
Sbjct: 293 CRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMF 350
Query: 298 VEVNVSVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYISDVYYVPAMKNNILSLGQLLE 357
VE++ SVKG V FGD SK+ V GKGN+LI+LKNG+H +IS+VYYVP+MK+NILSLGQLLE
Sbjct: 351 VELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLE 410
Query: 358 KGYDIRLKDLHLTLRDKSGTLIAKVKMAKNRLFPLNIQHGDAKCLNSIVKDKSWLWHLRL 417
KGYDI+LK+ +L++RD + IAKV M +NR+F LNIQ +CL KD+SWLWHLR
Sbjct: 411 KGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRF 470
Query: 418 GHLNFDGMKALASKNMVRGLPYIDRPNKVCEGCIFGKHHRTTFSKEGRWRAYNPLELVHT 477
GHLNF G++ L+ K MVRGLP I PN+VCEGC+ GK R +F KE RA PLEL+HT
Sbjct: 471 GHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHT 530
Query: 478 DVCGPLKPMTNGGNNYFLTFIDDYSRKTWVYFLKNKSEVFEVFKEFKNMVEKQSGYFIKK 537
DVCGP+KP + G +NYFL FIDD+SRKTWVYFLK KSEVFE FK+FK VEK+SG IK
Sbjct: 531 DVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKA 590
Query: 538 LRSDRGGEFTSRDFDMFCKEHGIIHELTPPYTPQLNGVAERKNRTILNMARSMLKEKSLP 597
LRSDRGGEFTS++F +C+++GI +LT P +PQ NGVAERKNRTIL MARSMLK K LP
Sbjct: 591 LRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLP 650
Query: 598 REFWGEAVACAVYLLNRCPTKSVYMKTPQEAWGYYKPSVSHLKIFGCIAYAKIPEARRTK 657
+EFW EAVACAVYL NR PT+SV KTPQEAW KP +SHL++FG IA+ +P+ +R+K
Sbjct: 651 KEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSK 710
Query: 658 LDDKGEKCIFLGYSEQTKCYKV--------LLSRDVVFEEEMTWEW 695
LDDK EK IF+GY +K YK+ ++SR+VVF+EE W+W
Sbjct: 711 LDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDW 756
>KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/706 (56%), Positives = 508/706 (71%), Gaps = 27/706 (3%)
Query: 2 DKKVLFLIYQGIDGPTFEKVSEAKSSQEAWNILKNSFRGVDKVVKVRLQILRGEFEKLSM 61
DKK L LIYQG+D TFEK+S K+++EAW LK S++G D+V KVRLQ LRGEFE L M
Sbjct: 66 DKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHM 125
Query: 62 NEGELISDYISRVLSNVNKMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVIEESKDLESM 121
EGEL+SDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE+KDLE+M
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAM 185
Query: 122 TVDELTGTLQIHEQRVNRNSASTSNYSVDQVLQAKLTLEEKQYAPQRERDYKSYGRDYDN 181
++++L G+LQ +E+ V+QV +A + +++ A + R +SY ++
Sbjct: 186 SIEQLLGSLQAYEE-----KKKKKEEIVEQVFKAHVDSRKEENAHNQSR--RSYSQEQGR 238
Query: 182 SRSEFGSQRGR---NFFNRGRT-NEPRERENFTRPYNRQGRDKRNIECYNCHKLGHYSNE 237
R+ +G +GR N RG + N R R N Y DK I+CYNC+K GHY++E
Sbjct: 239 GRA-YGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNCNKFGHYASE 292
Query: 238 CWYNKKNEVREDANLVENDVEINVDPTLLFSCDGLDESQTNTWYFDTGASNLICGKRELF 297
C KN+V E AN E + D TLL + G D+ + N WY D+GASN +CGKR +F
Sbjct: 293 CRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMF 350
Query: 298 VEVNVSVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYISDVYYVPAMKNNILSLGQLLE 357
VE++ SVKG V FGD SK+ V GKGN+LI+LKNG+H +IS+VYYVP+MK+NILSLGQLLE
Sbjct: 351 VELDESVKGNVAFGDESKVAVEGKGNVLIRLKNGEHQFISNVYYVPSMKSNILSLGQLLE 410
Query: 358 KGYDIRLKDLHLTLRDKSGTLIAKVKMAKNRLFPLNIQHGDAKCLNSIVKDKSWLWHLRL 417
KGYDI+LK+ +L++RD + IAKV M +NR+F LNIQ +CL KD+SWLWHLR
Sbjct: 411 KGYDIQLKNNNLSIRDNTSRFIAKVPMTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRF 470
Query: 418 GHLNFDGMKALASKNMVRGLPYIDRPNKVCEGCIFGKHHRTTFSKEGRWRAYNPLELVHT 477
GHLNF G++ L+ K MVRGLP I PN+VCEGC+ GK R +F KE RA PLEL+HT
Sbjct: 471 GHLNFKGLELLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHT 530
Query: 478 DVCGPLKPMTNGGNNYFLTFIDDYSRKTWVYFLKNKSEVFEVFKEFKNMVEKQSGYFIKK 537
DVCGP+KP + G +NYFL FIDD+SRKTWVYFLK KSEVFE FK+FK VEK+SG IK
Sbjct: 531 DVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKA 590
Query: 538 LRSDRGGEFTSRDFDMFCKEHGIIHELTPPYTPQLNGVAERKNRTILNMARSMLKEKSLP 597
LRSDRGGEFTS++F +C+++GI +LT P +PQ NGVAERKNRTIL MARSMLK K LP
Sbjct: 591 LRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLP 650
Query: 598 REFWGEAVACAVYLLNRCPTKSVYMKTPQEAWGYYKPSVSHLKIFGCIAYAKIPEARRTK 657
+EFW EAVACAVYL NR PT+SV KTPQEAW KP +SHL++FG IA+ +P+ +R+K
Sbjct: 651 KEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSK 710
Query: 658 LDDKGEKCIFLGYSEQTKCYKV--------LLSRDVVFEEEMTWEW 695
LDDK EK IF+GY +K YK+ ++SR+VVF+EE W+W
Sbjct: 711 LDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDW 756
>KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1331
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/706 (56%), Positives = 506/706 (71%), Gaps = 27/706 (3%)
Query: 2 DKKVLFLIYQGIDGPTFEKVSEAKSSQEAWNILKNSFRGVDKVVKVRLQILRGEFEKLSM 61
DKK L LIYQG+D TFEK+S K+++EAW LK S++G D+V KVRLQ LRGEFE L M
Sbjct: 55 DKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRGEFEALHM 114
Query: 62 NEGELISDYISRVLSNVNKMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVIEESKDLESM 121
EGEL+SDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE+KDLE+M
Sbjct: 115 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAM 174
Query: 122 TVDELTGTLQIHEQRVNRNSASTSNYSVDQVLQAKLTLEEKQYAPQRERDYKSYGRDYDN 181
++++L G+LQ +E+ V+QV +A + +++ A + R +SY ++
Sbjct: 175 SIEQLLGSLQAYEE-----KKKKKEEIVEQVFKAHVDSRKEENAHNQSR--RSYSQEQGR 227
Query: 182 SRSEFGSQRGR---NFFNRGRT-NEPRERENFTRPYNRQGRDKRNIECYNCHKLGHYSNE 237
R+ +G +GR N RG + N R R N Y DK I+CYNC+K GHY++E
Sbjct: 228 GRA-YGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNCNKFGHYASE 281
Query: 238 CWYNKKNEVREDANLVENDVEINVDPTLLFSCDGLDESQTNTWYFDTGASNLICGKRELF 297
C KN+V E AN E + D TLL + G D+ + N WY D+GASN +CGKR +F
Sbjct: 282 CRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMF 339
Query: 298 VEVNVSVKGCVKFGDSSKIPVLGKGNILIQLKNGKHNYISDVYYVPAMKNNILSLGQLLE 357
VE++ SVKG V FGD SK+ V GKGN+LIQLKNG+H +IS++YYVP+MK+NILSLGQLLE
Sbjct: 340 VELDESVKGNVAFGDESKVAVEGKGNVLIQLKNGEHQFISNIYYVPSMKSNILSLGQLLE 399
Query: 358 KGYDIRLKDLHLTLRDKSGTLIAKVKMAKNRLFPLNIQHGDAKCLNSIVKDKSWLWHLRL 417
KGYDI+LK+ +L++RD + I KV M +NR+F LNIQ +CL KD+SWLWHLR
Sbjct: 400 KGYDIQLKNNNLSIRDNTSRFITKVPMMRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRF 459
Query: 418 GHLNFDGMKALASKNMVRGLPYIDRPNKVCEGCIFGKHHRTTFSKEGRWRAYNPLELVHT 477
GHLNF G+ L+ K MVRGLP I PN+VCEGC+ GK R +F KE RA PLEL+HT
Sbjct: 460 GHLNFKGLDLLSKKAMVRGLPCITHPNQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHT 519
Query: 478 DVCGPLKPMTNGGNNYFLTFIDDYSRKTWVYFLKNKSEVFEVFKEFKNMVEKQSGYFIKK 537
DVCGP+KP + G +NYFL FIDD+SRKTWVYFLK KSEVFE FK+FK VEK+SG IK
Sbjct: 520 DVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKA 579
Query: 538 LRSDRGGEFTSRDFDMFCKEHGIIHELTPPYTPQLNGVAERKNRTILNMARSMLKEKSLP 597
LRSDRGGEFTS++F +C+++GI +LT P +PQ NGVAERKNRTIL MARSMLK K LP
Sbjct: 580 LRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLP 639
Query: 598 REFWGEAVACAVYLLNRCPTKSVYMKTPQEAWGYYKPSVSHLKIFGCIAYAKIPEARRTK 657
+EFW EAVACAVYL NR PT+SV KTPQEAW KP +SHL++FG IA+ +P+ +R+K
Sbjct: 640 KEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSK 699
Query: 658 LDDKGEKCIFLGYSEQTKCYKV--------LLSRDVVFEEEMTWEW 695
LDDK EK IF+GY +K YK+ ++SR+VVF+EE W+W
Sbjct: 700 LDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDW 745