BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2200.1
(639 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010276204.1 PREDICTED: pentatricopeptide repeat-containing pr... 893 0.0
XP_010648584.1 PREDICTED: pentatricopeptide repeat-containing pr... 887 0.0
CBI27156.3 unnamed protein product, partial [Vitis vinifera] 887 0.0
>XP_010276204.1 PREDICTED: pentatricopeptide repeat-containing protein At2g35130
[Nelumbo nucifera] XP_010276206.1 PREDICTED:
pentatricopeptide repeat-containing protein At2g35130
[Nelumbo nucifera]
Length = 584
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/563 (74%), Positives = 489/563 (86%), Gaps = 22/563 (3%)
Query: 77 QLAPLENSNRDSLFLDKRGRLRSFNHKKLSRKKGGTLRGKGWKYGTGFVDGVFPVLSPTA 136
Q+ P++ D+LFLDKRG RS N K+LSRKKGG+LRG+GWKYG+GF+DGVFPV+SPTA
Sbjct: 38 QVQPVDKHKHDNLFLDKRGVWRSINPKRLSRKKGGSLRGRGWKYGSGFIDGVFPVMSPTA 97
Query: 137 QKLFNLLKNQTSSKDDEEEEGKEVDANKGRSSIVWGYLEALPPTHTTWDDLINVVVQLRL 196
Q+L + ++ KE DAN +WG L+ LPPTH+TWDDLIN+VVQLRL
Sbjct: 98 QQLLDCIQ-------------KETDAN-----TIWGSLDILPPTHSTWDDLINIVVQLRL 139
Query: 197 NKQWDPIITVCKWILYRSSFQPDVMCYNLLIDSYGNKLLSSKAESIYLQLLEARVVPNED 256
+KQWDPI+ VC+WIL+RSSFQ DVMCYNLLID+YG K KAES YL LL+AR VP ED
Sbjct: 140 SKQWDPIVLVCEWILHRSSFQADVMCYNLLIDAYGQKFQYKKAESAYLGLLQARCVPTED 199
Query: 257 TYALLLKAYCKSGFLDKAEAVFSELRIHGFPPSVVVYNAYIEGLMQLGRGNTKKAVEIFE 316
TYALL++AY SGF++KAEA+F+E+R +G PPSVVVYNAYI+GLM+ GR NT+KA++IFE
Sbjct: 200 TYALLIRAYSISGFIEKAEAIFAEMRKYGVPPSVVVYNAYIDGLMK-GR-NTQKALDIFE 257
Query: 317 RMKRDRCQPSTETYTMLINLYGKASRSFMALKVFKEMISQKCKPNICTYTALMNAFAREG 376
RMKRD CQPSTETYTMLINLYGKAS+S MALK+F+EM +QKCKPNICTYTAL+NAFAREG
Sbjct: 258 RMKRDNCQPSTETYTMLINLYGKASKSHMALKIFREMKNQKCKPNICTYTALINAFAREG 317
Query: 377 LCEKAEQVFEDLQEDGYEPDVYVYNALMESYSRAGFPHGAAEIFSLMQHMGCEPDRASYN 436
LCEKAE+VFE+LQE G+EPDVY YNALME+YSRAGFP+GAAEIFSLMQHMGCEPDRASYN
Sbjct: 318 LCEKAEEVFEELQEVGHEPDVYTYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYN 377
Query: 437 IMVDAYGRAGLHEDAREIFEELKKHGMTPTMKSHMLLLSAYSKSGDIAKCEEMVNQMHKS 496
IMVDAYGRAGLHEDA+ +FEELK+ GMTPTMKSHMLLLSAYSK+G++ KCEE+VNQMHKS
Sbjct: 378 IMVDAYGRAGLHEDAQAVFEELKRLGMTPTMKSHMLLLSAYSKTGNVEKCEEIVNQMHKS 437
Query: 497 GLEPDTYVLNSMLNTYGRTGQFSKMEEVFKVMESGDSNYEADISTYNILINVYGRSGFFD 556
GL PDT+VLNSMLNTYGR GQF KMEEV ME+G YEADISTYNILIN+YGR+GF D
Sbjct: 438 GLRPDTFVLNSMLNTYGRMGQFKKMEEVLSAMENGP--YEADISTYNILINIYGRAGFLD 495
Query: 557 RMEELFSSLPAKGLKADVVTWTSRMGAYSKKKQYLRCLEIFEEMVDAGCYPDGGTAKVLL 616
+ME+LF SLP+K LK DVVTWTSRMGAYS+KK Y +C++IFEEM+D+GCYPDGGTAKVLL
Sbjct: 496 KMEDLFESLPSKNLKPDVVTWTSRMGAYSRKKLYTKCIKIFEEMIDSGCYPDGGTAKVLL 555
Query: 617 SACSNEDQIQQVTTVIRTMHKKI 639
SACS+EDQI+QVTTVIRTMHK +
Sbjct: 556 SACSSEDQIEQVTTVIRTMHKDM 578
>XP_010648584.1 PREDICTED: pentatricopeptide repeat-containing protein At2g35130
isoform X1 [Vitis vinifera] XP_002276864.2 PREDICTED:
pentatricopeptide repeat-containing protein At2g35130
isoform X2 [Vitis vinifera]
Length = 574
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/559 (74%), Positives = 477/559 (85%), Gaps = 22/559 (3%)
Query: 81 LENSNRDSLFLDKRGRLRSFNHKKLSRKKGGTLRGKGWKYGTGFVDGVFPVLSPTAQKLF 140
+E RDSLF+DKRG+ RSFN KK SRKKGG+LRG+GWKYG+GFVDG+FPV+SP AQ++
Sbjct: 34 VEKGKRDSLFIDKRGKFRSFNFKKQSRKKGGSLRGRGWKYGSGFVDGIFPVMSPIAQQIL 93
Query: 141 NLLKNQTSSKDDEEEEGKEVDANKGRSSIVWGYLEALPPTHTTWDDLINVVVQLRLNKQW 200
+ ++ + RS+ +WG L++L P HTTWDD+INV VQLRLNKQW
Sbjct: 94 DFVQKEE------------------RSNRIWGSLDSLSPNHTTWDDIINVAVQLRLNKQW 135
Query: 201 DPIITVCKWILYRSSFQPDVMCYNLLIDSYGNKLLSSKAESIYLQLLEARVVPNEDTYAL 260
D I+ +C WILYRSSF PDV+CYNLLID+YG K L KAES YL+LLEAR VP EDTYAL
Sbjct: 136 DAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYAL 195
Query: 261 LLKAYCKSGFLDKAEAVFSELRIHGFPPSVVVYNAYIEGLMQLGRGNTKKAVEIFERMKR 320
LLKAYC SG L+KAEAVF+E+R +GFPPS VVYNAYI+GLM+ G+T+KAVEIFERMKR
Sbjct: 196 LLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMK--GGDTQKAVEIFERMKR 253
Query: 321 DRCQPSTETYTMLINLYGKASRSFMALKVFKEMISQKCKPNICTYTALMNAFAREGLCEK 380
DRCQPST TYTMLINLYGKAS+S+MALKVF EM SQKCKPNICT+TAL+NAFAREGLCEK
Sbjct: 254 DRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEK 313
Query: 381 AEQVFEDLQEDGYEPDVYVYNALMESYSRAGFPHGAAEIFSLMQHMGCEPDRASYNIMVD 440
AE++FE LQE G EPDVY YNALME+YSRAGFP+GAAEIFSLMQHMGCEPDRASYNIMVD
Sbjct: 314 AEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 373
Query: 441 AYGRAGLHEDAREIFEELKKHGMTPTMKSHMLLLSAYSKSGDIAKCEEMVNQMHKSGLEP 500
AYGRAGLHEDA+ +FE +K+ G+TPTMKSHMLLLSAYS++G +AKCEE+VNQMHKSG++P
Sbjct: 374 AYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP 433
Query: 501 DTYVLNSMLNTYGRTGQFSKMEEVFKVMESGDSNYEADISTYNILINVYGRSGFFDRMEE 560
DT+VLNSMLN YGR GQF KMEEV ME G Y ADISTYNILIN+YGR+GFF RMEE
Sbjct: 434 DTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP--YPADISTYNILINIYGRAGFFARMEE 491
Query: 561 LFSSLPAKGLKADVVTWTSRMGAYSKKKQYLRCLEIFEEMVDAGCYPDGGTAKVLLSACS 620
LF SLPA+ L DVVTWTSR+GAYS++KQY RCLE+FEEM+DAGCYPDGGTAKVLLSACS
Sbjct: 492 LFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACS 551
Query: 621 NEDQIQQVTTVIRTMHKKI 639
N DQIQ+VTTVIRTMHK +
Sbjct: 552 NGDQIQEVTTVIRTMHKDM 570
>CBI27156.3 unnamed protein product, partial [Vitis vinifera]
Length = 625
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/559 (74%), Positives = 477/559 (85%), Gaps = 22/559 (3%)
Query: 81 LENSNRDSLFLDKRGRLRSFNHKKLSRKKGGTLRGKGWKYGTGFVDGVFPVLSPTAQKLF 140
+E RDSLF+DKRG+ RSFN KK SRKKGG+LRG+GWKYG+GFVDG+FPV+SP AQ++
Sbjct: 85 VEKGKRDSLFIDKRGKFRSFNFKKQSRKKGGSLRGRGWKYGSGFVDGIFPVMSPIAQQIL 144
Query: 141 NLLKNQTSSKDDEEEEGKEVDANKGRSSIVWGYLEALPPTHTTWDDLINVVVQLRLNKQW 200
+ ++ + RS+ +WG L++L P HTTWDD+INV VQLRLNKQW
Sbjct: 145 DFVQKEE------------------RSNRIWGSLDSLSPNHTTWDDIINVAVQLRLNKQW 186
Query: 201 DPIITVCKWILYRSSFQPDVMCYNLLIDSYGNKLLSSKAESIYLQLLEARVVPNEDTYAL 260
D I+ +C WILYRSSF PDV+CYNLLID+YG K L KAES YL+LLEAR VP EDTYAL
Sbjct: 187 DAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYAL 246
Query: 261 LLKAYCKSGFLDKAEAVFSELRIHGFPPSVVVYNAYIEGLMQLGRGNTKKAVEIFERMKR 320
LLKAYC SG L+KAEAVF+E+R +GFPPS VVYNAYI+GLM+ G+T+KAVEIFERMKR
Sbjct: 247 LLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMK--GGDTQKAVEIFERMKR 304
Query: 321 DRCQPSTETYTMLINLYGKASRSFMALKVFKEMISQKCKPNICTYTALMNAFAREGLCEK 380
DRCQPST TYTMLINLYGKAS+S+MALKVF EM SQKCKPNICT+TAL+NAFAREGLCEK
Sbjct: 305 DRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEK 364
Query: 381 AEQVFEDLQEDGYEPDVYVYNALMESYSRAGFPHGAAEIFSLMQHMGCEPDRASYNIMVD 440
AE++FE LQE G EPDVY YNALME+YSRAGFP+GAAEIFSLMQHMGCEPDRASYNIMVD
Sbjct: 365 AEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 424
Query: 441 AYGRAGLHEDAREIFEELKKHGMTPTMKSHMLLLSAYSKSGDIAKCEEMVNQMHKSGLEP 500
AYGRAGLHEDA+ +FE +K+ G+TPTMKSHMLLLSAYS++G +AKCEE+VNQMHKSG++P
Sbjct: 425 AYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKP 484
Query: 501 DTYVLNSMLNTYGRTGQFSKMEEVFKVMESGDSNYEADISTYNILINVYGRSGFFDRMEE 560
DT+VLNSMLN YGR GQF KMEEV ME G Y ADISTYNILIN+YGR+GFF RMEE
Sbjct: 485 DTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGP--YPADISTYNILINIYGRAGFFARMEE 542
Query: 561 LFSSLPAKGLKADVVTWTSRMGAYSKKKQYLRCLEIFEEMVDAGCYPDGGTAKVLLSACS 620
LF SLPA+ L DVVTWTSR+GAYS++KQY RCLE+FEEM+DAGCYPDGGTAKVLLSACS
Sbjct: 543 LFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACS 602
Query: 621 NEDQIQQVTTVIRTMHKKI 639
N DQIQ+VTTVIRTMHK +
Sbjct: 603 NGDQIQEVTTVIRTMHKDM 621