BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2240.1
(544 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010250989.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 662 0.0
XP_010250988.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 658 0.0
XP_010246627.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 647 0.0
>XP_010250989.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like isoform X2
[Nelumbo nucifera]
Length = 559
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/558 (62%), Positives = 417/558 (74%), Gaps = 23/558 (4%)
Query: 1 MNESKVLIFGSFSEDELKSFQKQSAEKNASSRFQKQDLVFGSLDFAALSSLGGSDVNPKE 60
M+ SKVLIFGSF+EDE++SFQKQS+E NA +K++ FGSLDF + SLGG + P
Sbjct: 11 MSGSKVLIFGSFTEDEVRSFQKQSSE-NAVQPSEKKEFQFGSLDFETIRSLGGLNGEPVR 69
Query: 61 AGSQKVLGSAEKSKLVSKDSAPNNFKKENGVLSIVSGNCKENGSTQTYS--TPPSNGVKE 118
K + SK+V KD+A K N L + KENGS Q S + SNGVKE
Sbjct: 70 TNFTKGSKETQPSKVVGKDNAIKIVKTSNDNLQTAPESVKENGSIQNTSDCSSHSNGVKE 129
Query: 119 PEKTTSQSNLLSISQSKVASAVQTPFLGPHGFGGEMAKKTNSPPMSRS------ICNEIS 172
E+ + + N L IS A + + P + P G E S P++ + I + +
Sbjct: 130 FERVSVEFNSLCISHD--ADSTKQPTI-PRQHGLESGNLNRSFPITSNCKPGEIIADSTT 186
Query: 173 VTGFKEGEAKVMS------VNLLSRGLINLGNLCFLNATLQALLSCSPFVQLLQELRTRN 226
V ++ K ++ +LL RGLIN GNLCFLNATLQALLSC+PFVQL QELRTR+
Sbjct: 187 VPASRKDIQKTLNHPPAVVKDLLPRGLINSGNLCFLNATLQALLSCTPFVQLFQELRTRD 246
Query: 227 IPKIGYPTSWAFIEFISHFDIPNDSSTKKNETPVLKSGRSFSPSMFEPVLMNFTPEVPTG 286
IPKIG PT AF+EFIS FD+P DS+ KK E V+++GR FSP+MFEPVL NFTP+VP
Sbjct: 247 IPKIGCPTLCAFVEFISDFDMPTDSNLKKKEMTVIETGRPFSPTMFEPVLKNFTPDVPYC 306
Query: 287 VSGRPRQEDAQEFLSFVMDQMHDELLKLEGNFNSAGGKLSLISTAEVDDGWETVGPKNKS 346
+SGRPRQEDAQEFLSFVMDQMHDELLKLEG +S+GG +ST E DD WETVGPKNKS
Sbjct: 307 ISGRPRQEDAQEFLSFVMDQMHDELLKLEG-ISSSGGA---VSTTE-DDDWETVGPKNKS 361
Query: 347 AVTRTQSFVPSKLSAIFGGELKSVVKAKDIKASATVQPFLLLHLDIFPESISTIADALRL 406
AVTRTQSF+PS+LSAIFGG+L+SVVKA+ KASATVQPFLLLHLDIFPE++ TI DALRL
Sbjct: 362 AVTRTQSFIPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPEAVRTIEDALRL 421
Query: 407 FSAPERLEGYRTSEGGKAGVVTASKSVKIQTPSKILILHLMRFSYGSEGSTKLHKPVYFP 466
FSAPE LEGYR S GKAGVV+ASKSVKIQT SK++ILHLMRF+YGS+GSTKLHKPV FP
Sbjct: 422 FSAPETLEGYRISASGKAGVVSASKSVKIQTLSKVMILHLMRFTYGSQGSTKLHKPVRFP 481
Query: 467 LELVLGRELLVSPSSESRRYELVATITHHGKDPSKGHYTADTRHSEGQWLRYDDAYVTGI 526
LELVLGRELL +PSSE RRYELVATITHHG++PSKGHYTAD R+++GQWLRYDDA VT +
Sbjct: 482 LELVLGRELLDTPSSEGRRYELVATITHHGREPSKGHYTADARYTDGQWLRYDDASVTAV 541
Query: 527 RTDQVLHDQAYLLFYKQV 544
+VLHDQAY+LFYKQV
Sbjct: 542 SISKVLHDQAYVLFYKQV 559
>XP_010250988.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
[Nelumbo nucifera]
Length = 560
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/554 (62%), Positives = 414/554 (74%), Gaps = 23/554 (4%)
Query: 5 KVLIFGSFSEDELKSFQKQSAEKNASSRFQKQDLVFGSLDFAALSSLGGSDVNPKEAGSQ 64
+VLIFGSF+EDE++SFQKQS+E NA +K++ FGSLDF + SLGG + P
Sbjct: 16 QVLIFGSFTEDEVRSFQKQSSE-NAVQPSEKKEFQFGSLDFETIRSLGGLNGEPVRTNFT 74
Query: 65 KVLGSAEKSKLVSKDSAPNNFKKENGVLSIVSGNCKENGSTQTYS--TPPSNGVKEPEKT 122
K + SK+V KD+A K N L + KENGS Q S + SNGVKE E+
Sbjct: 75 KGSKETQPSKVVGKDNAIKIVKTSNDNLQTAPESVKENGSIQNTSDCSSHSNGVKEFERV 134
Query: 123 TSQSNLLSISQSKVASAVQTPFLGPHGFGGEMAKKTNSPPMSRS------ICNEISVTGF 176
+ + N L IS A + + P + P G E S P++ + I + +V
Sbjct: 135 SVEFNSLCISHD--ADSTKQPTI-PRQHGLESGNLNRSFPITSNCKPGEIIADSTTVPAS 191
Query: 177 KEGEAKVMS------VNLLSRGLINLGNLCFLNATLQALLSCSPFVQLLQELRTRNIPKI 230
++ K ++ +LL RGLIN GNLCFLNATLQALLSC+PFVQL QELRTR+IPKI
Sbjct: 192 RKDIQKTLNHPPAVVKDLLPRGLINSGNLCFLNATLQALLSCTPFVQLFQELRTRDIPKI 251
Query: 231 GYPTSWAFIEFISHFDIPNDSSTKKNETPVLKSGRSFSPSMFEPVLMNFTPEVPTGVSGR 290
G PT AF+EFIS FD+P DS+ KK E V+++GR FSP+MFEPVL NFTP+VP +SGR
Sbjct: 252 GCPTLCAFVEFISDFDMPTDSNLKKKEMTVIETGRPFSPTMFEPVLKNFTPDVPYCISGR 311
Query: 291 PRQEDAQEFLSFVMDQMHDELLKLEGNFNSAGGKLSLISTAEVDDGWETVGPKNKSAVTR 350
PRQEDAQEFLSFVMDQMHDELLKLEG +S+GG +ST E DD WETVGPKNKSAVTR
Sbjct: 312 PRQEDAQEFLSFVMDQMHDELLKLEG-ISSSGGA---VSTTE-DDDWETVGPKNKSAVTR 366
Query: 351 TQSFVPSKLSAIFGGELKSVVKAKDIKASATVQPFLLLHLDIFPESISTIADALRLFSAP 410
TQSF+PS+LSAIFGG+L+SVVKA+ KASATVQPFLLLHLDIFPE++ TI DALRLFSAP
Sbjct: 367 TQSFIPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPEAVRTIEDALRLFSAP 426
Query: 411 ERLEGYRTSEGGKAGVVTASKSVKIQTPSKILILHLMRFSYGSEGSTKLHKPVYFPLELV 470
E LEGYR S GKAGVV+ASKSVKIQT SK++ILHLMRF+YGS+GSTKLHKPV FPLELV
Sbjct: 427 ETLEGYRISASGKAGVVSASKSVKIQTLSKVMILHLMRFTYGSQGSTKLHKPVRFPLELV 486
Query: 471 LGRELLVSPSSESRRYELVATITHHGKDPSKGHYTADTRHSEGQWLRYDDAYVTGIRTDQ 530
LGRELL +PSSE RRYELVATITHHG++PSKGHYTAD R+++GQWLRYDDA VT + +
Sbjct: 487 LGRELLDTPSSEGRRYELVATITHHGREPSKGHYTADARYTDGQWLRYDDASVTAVSISK 546
Query: 531 VLHDQAYLLFYKQV 544
VLHDQAY+LFYKQV
Sbjct: 547 VLHDQAYVLFYKQV 560
>XP_010246627.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Nelumbo
nucifera]
Length = 545
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/553 (61%), Positives = 406/553 (73%), Gaps = 17/553 (3%)
Query: 1 MNESKVLIFGSFSEDELKSFQKQSAEKNASSRFQKQDLVFGSLDFAALSSLGGSDVNPKE 60
M++SKV IFGSF+EDE++SFQ+Q++E N K+DL FGSLDF + SLGG P +
Sbjct: 1 MSDSKVFIFGSFTEDEVRSFQRQASE-NTVQPLGKKDLRFGSLDFETVRSLGGLKCEPVQ 59
Query: 61 AGSQKVLGSAEKSKLVSKDSAPNNFKKENGVLSIVSGNCKENGSTQTYS--TPPSNGVKE 118
A S K + +V KD+A L VSG+ KENGS Q S +P NGVKE
Sbjct: 60 ADSLKGSKDFQLPNMVVKDNAIKTVNAATNKLQRVSGSMKENGSIQNSSNFSPYCNGVKE 119
Query: 119 PEKTTSQSNLLSISQS-----KVASAVQTPFL-GPHGFGGEMAKKTNSPPMSRSICNEIS 172
E L IS ++ S V FL H E+ +++ S +
Sbjct: 120 HEGGCLDFPSLYISLDAGPPKQLTSPVDRNFLITSHSIPDEVLVNSSTLVASNDDIQKAV 179
Query: 173 VTGFKEGEAKVMSVNLLSRGLINLGNLCFLNATLQALLSCSPFVQLLQELRTRNIPKIGY 232
++ +LL RGLIN GNLCFLNATLQALLSCSPFVQLLQELRTR+IPK GY
Sbjct: 180 ------NQSSTFVKDLLPRGLINSGNLCFLNATLQALLSCSPFVQLLQELRTRDIPKTGY 233
Query: 233 PTSWAFIEFISHFDIPNDSSTKKNETPVLKSGRSFSPSMFEPVLMNFTPEVPTGVSGRPR 292
PT AF+EFIS FD+P S+ KK E V+++G F P+MFEP+L NFTP+VP +SGR R
Sbjct: 234 PTLCAFVEFISDFDMPTGSTLKKKEMSVVETGLPFRPAMFEPILKNFTPDVPNSISGRHR 293
Query: 293 QEDAQEFLSFVMDQMHDELLKLEGNFNSAG-GKLSLISTAEVDDGWETVGPKNKSAVTRT 351
QEDAQEFLSF+MDQMHDELLKLE F+S+ K SL+S E +DGWETVGPKN+S+VTRT
Sbjct: 294 QEDAQEFLSFIMDQMHDELLKLEDQFSSSTTAKASLVSNVE-EDGWETVGPKNRSSVTRT 352
Query: 352 QSFVPSKLSAIFGGELKSVVKAKDIKASATVQPFLLLHLDIFPESISTIADALRLFSAPE 411
QSF+PS+LSAIFGG+L+SVVKA+ KASATVQPFLLLHLDIFPE++ +I DALR FSAPE
Sbjct: 353 QSFIPSELSAIFGGQLRSVVKARGNKASATVQPFLLLHLDIFPEAVCSIEDALRQFSAPE 412
Query: 412 RLEGYRTSEGGKAGVVTASKSVKIQTPSKILILHLMRFSYGSEGSTKLHKPVYFPLELVL 471
LEGYRTS GKAGVV+ASKSVKIQT SKI+ILHLMRFSYGS+GS KLHKPV+FPLELVL
Sbjct: 413 TLEGYRTSVSGKAGVVSASKSVKIQTLSKIMILHLMRFSYGSQGSMKLHKPVHFPLELVL 472
Query: 472 GRELLVSPSSESRRYELVATITHHGKDPSKGHYTADTRHSEGQWLRYDDAYVTGIRTDQV 531
GRELLVSPS+E RRYELVATITHHG++PS+GHYTAD R+S GQWLRYDDA VT + ++V
Sbjct: 473 GRELLVSPSAEGRRYELVATITHHGREPSRGHYTADVRYSNGQWLRYDDASVTAVGVNKV 532
Query: 532 LHDQAYLLFYKQV 544
LHDQAY+LFYKQV
Sbjct: 533 LHDQAYVLFYKQV 545