BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2380.1
(129 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002865522.1 hypothetical protein ARALYDRAFT_917523 [Arabidops... 52 4e-05
>XP_002865522.1 hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
lyrata] EFH41781.1 hypothetical protein
ARALYDRAFT_917523 [Arabidopsis lyrata subsp. lyrata]
Length = 352
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 19 QNPEECECRTILYAMQWACDLCIQYIQIESDNQNLIRCLYNSNASIQWKSEKHMDEILAL 78
Q EE EC +++A+Q + L ++++ E DN N++ + + I + + +M+EI
Sbjct: 239 QTIEEAECSALIWAIQASWALGYRHVEFEGDNANIVNLI--NEGGINLRLKHYMEEIWQW 296
Query: 79 KDKFESIIFTHTTRQNNSQADILAK 103
++ F SI FT R+ N AD+LA+
Sbjct: 297 RNMFNSIKFTFRHREQNGCADLLAR 321