BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2410.1
(114 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009389539.1 PREDICTED: 40S ribosomal protein S2-4-like [Musa ... 146 2e-41
XP_010906118.1 PREDICTED: 40S ribosomal protein S2-2-like [Elaei... 145 5e-41
XP_016650251.1 PREDICTED: 40S ribosomal protein S2-4 [Prunus mume] 141 2e-40
>XP_009389539.1 PREDICTED: 40S ribosomal protein S2-4-like [Musa acuminata subsp.
malaccensis]
Length = 277
Score = 146 bits (368), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 75/83 (90%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG++DVF S RGSTKTL NFVKATFDCL KTYGFLTPDFW ETRY+RSPFQ
Sbjct: 195 RVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPDFWTETRYSRSPFQ 254
Query: 92 EFTDLLAKPTKALILEDVEKVDA 114
E+TDLLAKPTKA++LED EKV+A
Sbjct: 255 EYTDLLAKPTKAILLEDTEKVEA 277
>XP_010906118.1 PREDICTED: 40S ribosomal protein S2-2-like [Elaeis guineensis]
Length = 274
Score = 145 bits (365), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 76/83 (91%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG++DVF S RGSTKTL NFVKATFDCL KTYGFLTPDFWRETR+T+SPFQ
Sbjct: 192 RVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPDFWRETRFTKSPFQ 251
Query: 92 EFTDLLAKPTKALILEDVEKVDA 114
E+TDLLAKPTKA++LED E+V++
Sbjct: 252 EYTDLLAKPTKAIVLEDAERVES 274
>XP_016650251.1 PREDICTED: 40S ribosomal protein S2-4 [Prunus mume]
Length = 184
Score = 141 bits (355), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 75/83 (90%)
Query: 32 RGPKKVLKLAGVDDVFISFRGSTKTLSNFVKATFDCLQKTYGFLTPDFWRETRYTRSPFQ 91
R PKKVL+ AG+DDVF S RGSTKTL NFVKATFDCL KTYGFLTP+FW+ETR+++SPFQ
Sbjct: 102 RVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQ 161
Query: 92 EFTDLLAKPTKALILEDVEKVDA 114
EFTDLL +PTK L++EDVEKV+A
Sbjct: 162 EFTDLLGRPTKPLLIEDVEKVEA 184