BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2570.1
(480 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015075269.1 PREDICTED: F-box protein At2g23160-like [Solanum ... 92 7e-17
XP_002453292.1 hypothetical protein SORBIDRAFT_04g003334, partia... 83 5e-14
XP_017233738.1 PREDICTED: putative F-box protein At1g32420 [Dauc... 84 6e-14
>XP_015075269.1 PREDICTED: F-box protein At2g23160-like [Solanum pennellii]
Length = 359
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 54/281 (19%)
Query: 46 DCLEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLAR-----FKTRLPSRLFIV 100
D + FEIL +P KSL RFK VCK W LI+ D F+ H+AR TRL +++I
Sbjct: 12 DDMVFEILTWVPAKSLMRFKCVCKAWNDLIRHDLIFVKSHIARSRDRPLATRLLYQMYIK 71
Query: 101 VPQPPPPRKLIEDPDYVEFWPYKEFHITADILFEEENTKLKL----VVDTIREVDSSSYN 156
P P + ++ F L+L +V + +
Sbjct: 72 TPHIP------------------QHYVNDSTRFTNNQPPLELFPLQLVGSRNYFEYGDIF 113
Query: 157 VISKPVNGLISLIESYDEHVARIYSTSTGQVSPWFQASSIAVGEEHVALPNRYAFGFDPA 216
+ S NGL+ L D +Y+ +TG++ +A ++G + G+DPA
Sbjct: 114 ICSNHCNGLVCLYNGKDSQ-GLLYNITTGEI----KALPFSLGYKRRWDRPELYLGYDPA 168
Query: 217 TNEHKLVCVLTIRSDDRVFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLND---DYVYVN 273
T +KL+ +R++ Y + I N WRRI E P LN+ D +VN
Sbjct: 169 TERYKLL-------RNRIY-YKKRPCIKIRTLGTNTSWRRICENSPGKLNNLCSDRTFVN 220
Query: 274 GVIYWSNSSLDIWASRSGYRPVYLVAFDVGNEKFRTITIPD 314
GV+YW+N+++D ++ F++ EKF T+T P+
Sbjct: 221 GVLYWANANVD-----------FITYFNLTEEKFGTLTPPE 250
>XP_002453292.1 hypothetical protein SORBIDRAFT_04g003334, partial [Sorghum
bicolor]
Length = 289
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 24/244 (9%)
Query: 40 GSSIDDDCLEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFI 99
GS I D+ L FEIL RLPVKSL RFK+VCK WC I F+ LHL + R S + +
Sbjct: 19 GSMIPDEVLLFEILVRLPVKSLVRFKSVCKAWCATIA-SAHFVRLHLELARARSSSSM-V 76
Query: 100 VVPQPPPPRKLIEDPDYVEFWPYKEFHITADILFEEENTKLKLVVDTIREVDSSSYNVIS 159
+VP+ PR +V + ++ ++ KL++ + Y I
Sbjct: 77 IVPRKEQPRPTKLASGFVHIFSFRP---------ARQSNVAKLIMKSKPRPGGIPYFTIP 127
Query: 160 KPVNGLISLIESYDEHVARIYSTSTGQVSPWFQASSIAVGEEHVALPNRYAFGFDPATNE 219
+GLI LI S H+ + + +T + + G +VAL R AFGFDP++
Sbjct: 128 LHCDGLI-LIPSVTGHIF-VCNPATKEF------VELPRGTRNVALDQRVAFGFDPSSGT 179
Query: 220 HKLV--CVLTIRSDDRVFKYFLGG-VLTIGRQCNNNIWRRIKEFVPYSLNDDY-VYVNGV 275
+K+ + + + +Y +G VLT+G W+ + PY + + + G
Sbjct: 180 YKVARHFLRSYSEGQKRTEYDVGHEVLTLGDGIETLEWKATID-PPYPIKGRTPICLPGF 238
Query: 276 IYWS 279
YWS
Sbjct: 239 FYWS 242
>XP_017233738.1 PREDICTED: putative F-box protein At1g32420 [Daucus carota subsp.
sativus] KZN07308.1 hypothetical protein DCAR_008145
[Daucus carota subsp. sativus]
Length = 398
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 134/306 (43%), Gaps = 51/306 (16%)
Query: 41 SSIDDDCLEFEILNRLPVKSLARFKTVCKRWCYLIQKDQQFIDLHLARFKTRLPSRLFIV 100
S I DD + FEIL RLPVK L +F+ VCK W +LI +D FI H+AR PS ++
Sbjct: 5 SIIPDDIIRFEILTRLPVKILMQFQCVCKSWQFLISRDPIFIKAHVAR-SVMDPSNDRVI 63
Query: 101 VPQPPPPRKLIEDPDYVEFWPYKEFHITADILFEEENTKLKLV--VDTIREVDS---SSY 155
+ P R HI+ D +F N L + V + E D SS
Sbjct: 64 IRCHPTLRHK---------------HISEDNIF---NFPLFVCSKVGPVNEFDYPLLSSG 105
Query: 156 NVISKPVNGLISLIESYDEH----VARIYSTSTGQ---VSPWFQASSIAVGEEHVALPNR 208
V++ VNGL+ L D+ I++ +T + V P A +I G+
Sbjct: 106 MVLAGSVNGLVCLYSYNDKSKSIPCIGIWNPATHRYKDVRPPLNAYNIKAGDF------S 159
Query: 209 YAFGFDPATNEHKLVCVLTIRSDDRVFKYFLGGVLTIGRQCNNNIWRRIKEFVPYSLNDD 268
+AF FD ++K++ ++ R+ ++ K G V+ CN W I + L +
Sbjct: 160 FAFVFDSIKKDYKVIYIIKTRNKNKANK--PGQVVADVYSCNARSWAHINVSSSFELENG 217
Query: 269 YVY-----VNGVIYWSNSSLDIWASRSGYRPVYLVAFDVGNEKFRTITIPDYILDHPRVS 323
++ V +YW+ S + R +++FD+G+E FR PD + + +
Sbjct: 218 ELFKYAITVGNRVYWN-------YSMAYGRKHDVISFDIGHEVFRLFHAPDLLPNQKMAT 270
Query: 324 GRFKKI 329
G +
Sbjct: 271 GNLNNL 276