BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g2610.1
         (109 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002314076.1 photosystem II 5 kD family protein [Populus trich...    93   1e-22
XP_008349868.1 PREDICTED: photosystem II 5 kDa protein, chloropl...    91   1e-21
AAM61462.1 photosystem II [Arabidopsis thaliana]                       90   2e-21

>XP_002314076.1 photosystem II 5 kD family protein [Populus trichocarpa] EEE88031.1
           photosystem II 5 kD family protein [Populus trichocarpa]
          Length = 105

 Score = 93.2 bits (230), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 8/111 (7%)

Query: 1   MASIAMSTTSLVVSGVSPSGRTPSVNTRRGLVIVKASGASE-VDLSCETKQEKSCGRRSL 59
           MASI M+ + L  S ++   + PS   RRGL++ KAS A+E V++  + ++E S GRR L
Sbjct: 1   MASITMTASFLTGSAMA---KQPSTTPRRGLIVAKASRATEGVNVEMKNREESSGGRRDL 57

Query: 60  VSTAAAIAAAAACSVASIALADE-PKRGSEEAKKKYAAVCVTMPTARICRN 109
           +  AAA   AAA S+A +A+ADE P+RG+ EAKKKYA +CVTMPTARICRN
Sbjct: 58  MFAAAA---AAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICRN 105


>XP_008349868.1 PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Malus
           domestica]
          Length = 106

 Score = 90.9 bits (224), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 3/109 (2%)

Query: 1   MASIAMSTTSLVVSGVSPSGRTPSVNTRRGLVIVKASGASEVDLSCETKQEKSCGRRSLV 60
           MAS+ M+  S + +G + +   PS ++RR LV+ KA+  +    + + +   S GRR L+
Sbjct: 1   MASMTMTAASFLTAGSASTIAKPSTSSRRSLVVAKAAARAPEGETKKEESSSSSGRRDLI 60

Query: 61  STAAAIAAAAACSVASIALADEPKRGSEEAKKKYAAVCVTMPTARICRN 109
             AAA    AACS+A  ALADEPKRGS+EAK+KYA VCVTMPTARICRN
Sbjct: 61  FAAAA---VAACSLAKAALADEPKRGSKEAKEKYAPVCVTMPTARICRN 106


>AAM61462.1 photosystem II [Arabidopsis thaliana]
          Length = 106

 Score = 90.1 bits (222), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 77/112 (68%), Gaps = 9/112 (8%)

Query: 1   MASIAMSTTSLVVSGVSPSGRTPSVNTRRGLVIVKASGASEVDLSCETK-QEKSCG-RRS 58
           MAS+ M+++ L      P+    S N+RR L +VKASG SE   S E K QE+S   RR 
Sbjct: 1   MASMTMTSSFLPTVSNLPAN--ISSNSRRSLTVVKASG-SENTTSLENKEQEQSMKMRRD 57

Query: 59  LVSTAAAIAAAAACSVASIALAD-EPKRGSEEAKKKYAAVCVTMPTARICRN 109
           LV TAAA   AA CS+A +A+AD EPKRG+E AKKKYA VCVTMPTARICRN
Sbjct: 58  LVFTAAA---AAVCSLAKVAMADDEPKRGTEAAKKKYAPVCVTMPTARICRN 106

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