BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2640.1
(149 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002457223.1 hypothetical protein SORBIDRAFT_03g003583, partia... 151 1e-40
XP_002452318.1 hypothetical protein SORBIDRAFT_04g023610 [Sorghu... 144 3e-37
XP_002438569.1 hypothetical protein SORBIDRAFT_10g022040 [Sorghu... 142 2e-36
>XP_002457223.1 hypothetical protein SORBIDRAFT_03g003583, partial [Sorghum
bicolor]
Length = 564
Score = 151 bits (382), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 99/134 (73%)
Query: 6 PSTDEVHDAVKSLRSDAAPGPDGYSPFFFQNNWDTISRSIMHMVTHFFTSHDMPIDINRT 65
P EVH+ +K++R++AAPGPDG S F++++W+ + ++ +VT F+ + ++P DIN+T
Sbjct: 74 PDMKEVHNIIKNMRNNAAPGPDGLSAGFYKSSWEWTGKDVLDLVTAFYQTGNLPSDINKT 133
Query: 66 HISLLPKTNNPQTPVDYRPISLLNTTSKIISWIMADKFKRTLDHIITPFQSAFIPGRFIV 125
HI+L+PK N P TP DYRPISL N + K+I+ +AD+ K L HII P Q+AFI GR I
Sbjct: 134 HITLIPKVNTPVTPKDYRPISLCNVSYKVIAKSLADRIKCHLPHIIHPTQAAFIQGRHIA 193
Query: 126 DNVVLAQELVHSFN 139
N+++AQE++HSFN
Sbjct: 194 SNIIIAQEIIHSFN 207
>XP_002452318.1 hypothetical protein SORBIDRAFT_04g023610 [Sorghum bicolor]
Length = 701
Score = 144 bits (362), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 92/131 (70%)
Query: 9 DEVHDAVKSLRSDAAPGPDGYSPFFFQNNWDTISRSIMHMVTHFFTSHDMPIDINRTHIS 68
EVH + ++RS+AAPGPDG + F++ +WD I+ + +V F+ S +P +IN THI+
Sbjct: 2 QEVHSIINNMRSNAAPGPDGLNAAFYKASWDWIANDVYDLVASFYRSGYLPAEINYTHIT 61
Query: 69 LLPKTNNPQTPVDYRPISLLNTTSKIISWIMADKFKRTLDHIITPFQSAFIPGRFIVDNV 128
L+PK N P TP DYRPISL N KII+ +AD+ + L HII P Q+AF+ GR+I N+
Sbjct: 62 LIPKINAPLTPKDYRPISLCNVAYKIIAKSLADRIRNHLPHIIHPSQTAFVQGRYIASNI 121
Query: 129 VLAQELVHSFN 139
++AQE++HSFN
Sbjct: 122 IIAQEIIHSFN 132
>XP_002438569.1 hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
Length = 1088
Score = 142 bits (357), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 98/135 (72%)
Query: 5 IPSTDEVHDAVKSLRSDAAPGPDGYSPFFFQNNWDTISRSIMHMVTHFFTSHDMPIDINR 64
+P + E+ +K++RS+AAPGPDG + F++++W+ + ++++VT F+ ++ + DIN+
Sbjct: 434 VPDSSEILAIIKNMRSNAAPGPDGLNAEFYKSSWEWTGKDVVNLVTDFYNNNYLHPDINK 493
Query: 65 THISLLPKTNNPQTPVDYRPISLLNTTSKIISWIMADKFKRTLDHIITPFQSAFIPGRFI 124
T+I+++PK NNP TP DYRPISL N KII+ + D+ K L HII P QSAFI GR I
Sbjct: 494 TYIAMIPKVNNPNTPRDYRPISLCNVVYKIIAKSLVDRIKFHLPHIIHPSQSAFIKGRHI 553
Query: 125 VDNVVLAQELVHSFN 139
N+++AQE++HSFN
Sbjct: 554 ASNIIIAQEIIHSFN 568