BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2710.1
(114 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015068115.1 PREDICTED: zinc finger CCCH domain-containing pro... 144 4e-38
XP_006349561.1 PREDICTED: zinc finger CCCH domain-containing pro... 143 1e-37
XP_004234834.1 PREDICTED: zinc finger CCCH domain-containing pro... 143 1e-37
>XP_015068115.1 PREDICTED: zinc finger CCCH domain-containing protein 30 [Solanum
pennellii]
Length = 695
Score = 144 bits (363), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Query: 2 DSIPSP-TMKPNDHSLSVTSEKKEYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSH 60
DSI P + K ND +S TSE+KEYPIDPSLPDIKNGIYSTDEFRMFS K+ PCSR YSH
Sbjct: 197 DSISFPRSAKSNDTPVSCTSERKEYPIDPSLPDIKNGIYSTDEFRMFSFKIRPCSRAYSH 256
Query: 61 DWTKCPFVHPGENARRRDPRKFHY 84
DWT+CPFVHPGENARRRDPRK+HY
Sbjct: 257 DWTECPFVHPGENARRRDPRKYHY 280
>XP_006349561.1 PREDICTED: zinc finger CCCH domain-containing protein 30 [Solanum
tuberosum] XP_015165103.1 PREDICTED: zinc finger CCCH
domain-containing protein 30 [Solanum tuberosum]
Length = 695
Score = 143 bits (361), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 63/77 (81%), Positives = 69/77 (89%)
Query: 8 TMKPNDHSLSVTSEKKEYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPF 67
+ K ND +S TSEKKEYPIDPS+PDIKNGIYSTDEFRMFS K+ PCSR YSHDWT+CPF
Sbjct: 204 SAKSNDTPVSCTSEKKEYPIDPSMPDIKNGIYSTDEFRMFSFKIRPCSRAYSHDWTECPF 263
Query: 68 VHPGENARRRDPRKFHY 84
VHPGENARRRDPRK+HY
Sbjct: 264 VHPGENARRRDPRKYHY 280
>XP_004234834.1 PREDICTED: zinc finger CCCH domain-containing protein 30 [Solanum
lycopersicum]
Length = 695
Score = 143 bits (360), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 63/77 (81%), Positives = 69/77 (89%)
Query: 8 TMKPNDHSLSVTSEKKEYPIDPSLPDIKNGIYSTDEFRMFSLKVCPCSRVYSHDWTKCPF 67
+ K ND +S TSE+KEYPIDPSLPDIKNGIYSTDEFRMFS K+ PCSR YSHDWT+CPF
Sbjct: 204 SAKSNDTPVSCTSERKEYPIDPSLPDIKNGIYSTDEFRMFSFKIRPCSRAYSHDWTECPF 263
Query: 68 VHPGENARRRDPRKFHY 84
VHPGENARRRDPRK+HY
Sbjct: 264 VHPGENARRRDPRKYHY 280