BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2770.1
(153 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ANY30414.1 NADH dehydrogenase subunit 6, partial (mitochondrion)... 69 2e-11
YP_005090370.1 NADH dehydrogenase subunit 6 (mitochondrion) [Pho... 69 2e-11
YP_008080925.1 NADH dehydrogenase subunit 6 (mitochondrion) [But... 69 3e-11
>ANY30414.1 NADH dehydrogenase subunit 6, partial (mitochondrion) [Aponogeton
distachyos]
Length = 231
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/34 (97%), Positives = 34/34 (100%)
Query: 17 IPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVS 50
IPVFRDTSGLL+LLGLDFSAMISPVVHIGAIAVS
Sbjct: 31 IPVFRDTSGLLILLGLDFSAMISPVVHIGAIAVS 64
>YP_005090370.1 NADH dehydrogenase subunit 6 (mitochondrion) [Phoenix
dactylifera] AEM43911.1 NADH dehydrogenase subunit 6
(mitochondrion) [Phoenix dactylifera]
Length = 234
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 40/57 (70%)
Query: 17 IPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVSECVLCHQGGESIKRLFSECPRLI 73
IPVFRDTSGLL+LLGLDFSAMISPVVHIGAIAVS + I + E R +
Sbjct: 31 IPVFRDTSGLLILLGLDFSAMISPVVHIGAIAVSFLFVVMMFNIQIAEIHEEVLRYL 87
>YP_008080925.1 NADH dehydrogenase subunit 6 (mitochondrion) [Butomus umbellatus]
AFY16542.1 NADH dehydrogenase subunit 6 (mitochondrion)
[Butomus umbellatus]
Length = 229
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/34 (97%), Positives = 34/34 (100%)
Query: 17 IPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVS 50
IPVFRDTSGLL+LLGLDFSAMISPVVHIGAIAVS
Sbjct: 31 IPVFRDTSGLLILLGLDFSAMISPVVHIGAIAVS 64