BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g2890.1
(230 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010036349.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 293 5e-98
XP_010673001.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 289 2e-96
XP_003632734.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 286 2e-95
>XP_010036349.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A-like
[Eucalyptus grandis] KCW47892.1 hypothetical protein
EUGRSUZ_K01636 [Eucalyptus grandis]
Length = 238
Score = 293 bits (751), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 173/211 (81%)
Query: 19 PSCMSSWVDTGSVESHRYYLARRTILEMLKDRGYEVPDPDLDLSLHEFRAIYGQTPDVDR 78
P CMSS+VD GSV+SHRYYLARRT+LEML+DRGY +P D+D+SL EFRA +GQ+PD+DR
Sbjct: 27 PRCMSSYVDEGSVQSHRYYLARRTLLEMLRDRGYAIPSSDIDVSLAEFRATHGQSPDIDR 86
Query: 79 LRISLPLLSNPSKKILVIFCGTEKVKLGVMRGILGKIANDSGLNRLILVLQSTITSQAQE 138
LRIS L S+PSK++LV FC VK+ +R I G+IAN GL+ LILVLQ +T+QA +
Sbjct: 87 LRISNSLRSDPSKRVLVYFCNPGPVKVTSIRYISGQIANKDGLSGLILVLQGEMTNQALK 146
Query: 139 ALGLFNVTIEIFQINELLVNITKHVLMPKHEILTQEEKRKLLSKYNLKDKQLPRMLLSDA 198
AL LF +++FQI +LLVNITKHVL PKH +LT +EK++LL KY++++KQLPRML +DA
Sbjct: 147 ALDLFPFKVQVFQITDLLVNITKHVLKPKHRVLTDQEKQRLLKKYSIQEKQLPRMLKNDA 206
Query: 199 FVRYYGLQKGQIVKVTYDGDLTGTHVTYRCI 229
RYYGL+KGQ+VKVTY GD+TGTHVTYRC+
Sbjct: 207 IARYYGLEKGQVVKVTYSGDITGTHVTYRCV 237
>XP_010673001.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Beta vulgaris
subsp. vulgaris] KMT15157.1 hypothetical protein
BVRB_3g062710 [Beta vulgaris subsp. vulgaris]
Length = 224
Score = 289 bits (739), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 169/209 (80%)
Query: 21 CMSSWVDTGSVESHRYYLARRTILEMLKDRGYEVPDPDLDLSLHEFRAIYGQTPDVDRLR 80
C+SS+VD G+ ESHRY+LARRT LEMLKDRGY VP+ ++DLSLH+FR IYG PD DRLR
Sbjct: 15 CLSSFVDDGTTESHRYFLARRTTLEMLKDRGYAVPNSEIDLSLHDFRNIYGPKPDPDRLR 74
Query: 81 ISLPLLSNPSKKILVIFCGTEKVKLGVMRGILGKIANDSGLNRLILVLQSTITSQAQEAL 140
IS L S+ SKKILVIFCG + VK+ +RGI +I N L+ LILVLQS IT+QAQ+++
Sbjct: 75 ISTALRSDESKKILVIFCGPQLVKVNTIRGIGAQIVNRESLSGLILVLQSKITNQAQKSV 134
Query: 141 GLFNVTIEIFQINELLVNITKHVLMPKHEILTQEEKRKLLSKYNLKDKQLPRMLLSDAFV 200
LF +EIFQI +LLVNITKHVL P+H++LT EK KLL KYNL++KQLPRM + DA V
Sbjct: 135 DLFQFKVEIFQITDLLVNITKHVLKPRHQVLTPREKEKLLKKYNLQEKQLPRMSVKDAIV 194
Query: 201 RYYGLQKGQIVKVTYDGDLTGTHVTYRCI 229
RYYGL+KGQ++KVTY G++T +HVTYRC+
Sbjct: 195 RYYGLEKGQVLKVTYSGEITQSHVTYRCV 223
>XP_003632734.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Vitis
vinifera]
Length = 229
Score = 286 bits (733), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 173/229 (75%), Gaps = 1/229 (0%)
Query: 1 MEAGGSGGGAGGATLALMPSCMSSWVDTGSVESHRYYLARRTILEMLKDRGYEVPDPDLD 60
M+ GG G + C+SS+VD G +ESHRYYLARRT+LEML+DRGY +P D+D
Sbjct: 1 MDGGGWFDGDLNGDFE-VKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDID 59
Query: 61 LSLHEFRAIYGQTPDVDRLRISLPLLSNPSKKILVIFCGTEKVKLGVMRGILGKIANDSG 120
+SL +FR+ Y Q PD DRLRIS L S+PSKKILVIFCG + VK+ +R I +I N
Sbjct: 60 ISLQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDS 119
Query: 121 LNRLILVLQSTITSQAQEALGLFNVTIEIFQINELLVNITKHVLMPKHEILTQEEKRKLL 180
L++LILVLQ+ ITSQA +A+ LF+ +E FQI +LLVNITKHVL PKH +LT +EK KLL
Sbjct: 120 LSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLL 179
Query: 181 SKYNLKDKQLPRMLLSDAFVRYYGLQKGQIVKVTYDGDLTGTHVTYRCI 229
KY+L +KQLPRML DA RYYGL+KGQ+VKV Y+G++TG+HVTYRC+
Sbjct: 180 KKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCV 228