BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3060.1
(410 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009607882.1 PREDICTED: pentatricopeptide repeat-containing pr... 226 1e-63
XP_015082568.1 PREDICTED: pentatricopeptide repeat-containing pr... 222 2e-62
XP_006341261.1 PREDICTED: pentatricopeptide repeat-containing pr... 222 2e-62
>XP_009607882.1 PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial [Nicotiana tomentosiformis] XP_009607883.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g02650, mitochondrial [Nicotiana tomentosiformis]
XP_016475613.1 PREDICTED: pentatricopeptide
repeat-containing protein At3g02650, mitochondrial-like
[Nicotiana tabacum] XP_016475614.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Nicotiana tabacum]
Length = 720
Score = 226 bits (575), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 170/285 (59%), Gaps = 51/285 (17%)
Query: 146 LIIISEIDWLTLLDKIKQGNLGLYFKMAEHVLDEDSFQTNSRDYLKLMHAYTKDNRFDDA 205
L+ + +DW+ LLD++K+ N LY K+AEHVL E+SFQTN RDY KL+ A+ +DNR DA
Sbjct: 345 LLQPTRVDWVNLLDRLKERNPHLYLKIAEHVLGEESFQTNIRDYSKLIDAHARDNRLADA 404
Query: 206 ERILRKLTDKCWFIPPDIITFLILVQMYNKTNNVERAKASFDIIRRRDFLSAMKTNKSLI 265
ERI++K+++ I PDI+T +V MY+K ++++AKA+F+ +R + FL M S+I
Sbjct: 405 ERIIKKMSENG--IVPDILTSTTMVHMYSKAGDLDQAKAAFESLRTQGFLPDMGVYNSMI 462
Query: 266 MTFVNV----------------------------------------AQTLYTKMQLAHIQ 285
+ +VN AQ + T MQ + Q
Sbjct: 463 LAYVNAGEPKLGESLMREMEARDIKPSKEIFMALLRSFAQRGDVNGAQRIATTMQFSGFQ 522
Query: 286 PNLKSCAFLVDVYGQDGDSEQARRYIDNMIRLGYRPDDRCTSSMLAAYENKNLLDKALHL 345
P L+SC LV+ +G+ GD +QAR D MI+LG++PDDRCT+SM+AAYE KNLLDKAL+L
Sbjct: 523 PTLESCTLLVEAFGKAGDPDQARHNFDYMIKLGHKPDDRCTASMIAAYEKKNLLDKALNL 582
Query: 346 YLELEVEGVLTGFSTYKFLIEWLGVLEHVVHKEYFRKVDEKEMLL 390
+ELE +G G +TY L++W+G ++ +DE E LL
Sbjct: 583 LMELEKDGFEPGVATYSVLVDWMGKMQL---------IDEAEQLL 618
>XP_015082568.1 PREDICTED: pentatricopeptide repeat-containing protein At2g18940,
chloroplastic-like [Solanum pennellii] XP_015082569.1
PREDICTED: pentatricopeptide repeat-containing protein
At2g18940, chloroplastic-like [Solanum pennellii]
XP_015082570.1 PREDICTED: pentatricopeptide
repeat-containing protein At2g18940, chloroplastic-like
[Solanum pennellii]
Length = 711
Score = 222 bits (566), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 169/285 (59%), Gaps = 51/285 (17%)
Query: 146 LIIISEIDWLTLLDKIKQGNLGLYFKMAEHVLDEDSFQTNSRDYLKLMHAYTKDNRFDDA 205
L+ S +DW+ LLD+++ N LY K+AEHVL E+SF+TN RDY KL+ A+ +DNR +DA
Sbjct: 336 LLQPSRVDWINLLDRLQNRNPSLYLKIAEHVLGEESFETNIRDYSKLIDAHARDNRREDA 395
Query: 206 ERILRKLTDKCWFIPPDIITFLILVQMYNKTNNVERAKASFDIIRRRDFLSAMKTNKSLI 265
ERI+RK+ + I PDI+T +V MY+K +++RAKA+F+ +R + FL M S+I
Sbjct: 396 ERIIRKMRENG--IVPDILTSTTMVHMYSKAGDLDRAKAAFESLRTQGFLPDMGVYNSMI 453
Query: 266 MTFVNV----------------------------------------AQTLYTKMQLAHIQ 285
+ +VN AQ + T MQ + Q
Sbjct: 454 LAYVNAGDPKKGESLMKEMEVRDMKPSKKIYMALLRSFSQHGDANGAQRIATSMQFSGFQ 513
Query: 286 PNLKSCAFLVDVYGQDGDSEQARRYIDNMIRLGYRPDDRCTSSMLAAYENKNLLDKALHL 345
P L+SC LV+ +G+ GD +QAR+ D MI+LG++PDDRCT++M+AAYE NLLDKAL+L
Sbjct: 514 PTLESCMLLVEAFGKAGDPDQARQNFDYMIKLGHKPDDRCTATMIAAYEKNNLLDKALNL 573
Query: 346 YLELEVEGVLTGFSTYKFLIEWLGVLEHVVHKEYFRKVDEKEMLL 390
+ELE++G G +TY L++WL ++ +DE E LL
Sbjct: 574 LIELEIDGFEPGVATYSVLVDWLSKMQL---------IDEAEQLL 609
>XP_006341261.1 PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial [Solanum tuberosum]
Length = 708
Score = 222 bits (566), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 168/285 (58%), Gaps = 51/285 (17%)
Query: 146 LIIISEIDWLTLLDKIKQGNLGLYFKMAEHVLDEDSFQTNSRDYLKLMHAYTKDNRFDDA 205
L+ S +DW+ LLD++ N LY K+AEHVL E+SFQTN RDY KL+ A+ +DNR +DA
Sbjct: 333 LLQPSRVDWINLLDRLNNRNPSLYLKIAEHVLGEESFQTNIRDYSKLVDAHARDNRREDA 392
Query: 206 ERILRKLTDKCWFIPPDIITFLILVQMYNKTNNVERAKASFDIIRRRDFLSAMKTNKSLI 265
ERI+RK+++ I PDI+T I+V MY+K +++RAKA+F+ +R + FL M S+I
Sbjct: 393 ERIIRKMSENG--IVPDILTSTIMVHMYSKAGDLDRAKAAFESLRTQGFLPDMGVYNSMI 450
Query: 266 MTFVNV----------------------------------------AQTLYTKMQLAHIQ 285
+ +VN A + T MQ + Q
Sbjct: 451 LAYVNAGDPKKGESLMKEMEVRDIKPSKKIYMALLRSFSQHGDANGAHRIATTMQFSGFQ 510
Query: 286 PNLKSCAFLVDVYGQDGDSEQARRYIDNMIRLGYRPDDRCTSSMLAAYENKNLLDKALHL 345
P L+SC LV+ +G+ GD +QAR+ D MI+LG++PDDRCT++M+AAYE NLLDKAL+L
Sbjct: 511 PTLESCMLLVEAFGKAGDPDQARQNFDYMIKLGHKPDDRCTATMIAAYEKNNLLDKALNL 570
Query: 346 YLELEVEGVLTGFSTYKFLIEWLGVLEHVVHKEYFRKVDEKEMLL 390
+ELE +G G +TY L++WL ++ +DE E LL
Sbjct: 571 LIELEKDGFEPGVATYSVLVDWLSKMQL---------IDEAEQLL 606