BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3280.1
(134 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP66218.1 Copia protein [Cajanus cajan] 182 3e-56
KYP35061.1 Retrovirus-related Pol polyprotein from transposon TN... 182 1e-55
XP_017186550.1 PREDICTED: uncharacterized mitochondrial protein ... 181 3e-54
>KYP66218.1 Copia protein [Cajanus cajan]
Length = 192
Score = 182 bits (461), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 107/129 (82%)
Query: 1 MGYTAFTWSSKKQPIVTLSTCEAEYVAASSMVSHAISLRNMLKHLQCPQVGPTEVFLDNK 60
MG TAFTW SKKQPIVTLSTCEAEYVAA+S V HAI LRN+LK L PQV PT++++DNK
Sbjct: 62 MGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNK 121
Query: 61 SAIALAKNPVCHERNKHIDTRYHFIREHVKEGDIEVVYCKSQDQIADIFTNPLKHDVFER 120
SAIALAKNPV H+R+KHI TRYH+IRE + D+++ Y K+ DQ+ADIFT PLK +VF +
Sbjct: 122 SAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 181
Query: 121 LKWMLGMRS 129
L+ +LG+++
Sbjct: 182 LRSLLGVQN 190
>KYP35061.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan] KYP41722.1 Retrovirus-related Pol
polyprotein from transposon TNT 1-94 [Cajanus cajan]
Length = 240
Score = 182 bits (461), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 107/129 (82%)
Query: 1 MGYTAFTWSSKKQPIVTLSTCEAEYVAASSMVSHAISLRNMLKHLQCPQVGPTEVFLDNK 60
MG TAFTW SKKQPIVTLSTCEAEYVAA+S V HAI LRN+LK L PQV PT++++DNK
Sbjct: 110 MGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNK 169
Query: 61 SAIALAKNPVCHERNKHIDTRYHFIREHVKEGDIEVVYCKSQDQIADIFTNPLKHDVFER 120
SAIALAKNPV H+R+KHI TRYH+IRE + D+++ Y K+ DQ+ADIFT PLK +VF +
Sbjct: 170 SAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMK 229
Query: 121 LKWMLGMRS 129
L+ +LG+++
Sbjct: 230 LRSLLGVQN 238
>XP_017186550.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Malus domestica]
Length = 334
Score = 181 bits (460), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 103/128 (80%)
Query: 2 GYTAFTWSSKKQPIVTLSTCEAEYVAASSMVSHAISLRNMLKHLQCPQVGPTEVFLDNKS 61
G TAFTW SKKQPIVTLSTCEAEYVAA++ V H I LRN+L L PQ PTE+++DNKS
Sbjct: 153 GDTAFTWMSKKQPIVTLSTCEAEYVAATACVCHVIWLRNLLTELNMPQEEPTEIYVDNKS 212
Query: 62 AIALAKNPVCHERNKHIDTRYHFIREHVKEGDIEVVYCKSQDQIADIFTNPLKHDVFERL 121
AIALAKNPV H+R+KHIDTRYH+IRE + D++V Y KSQDQIADIFT PLK +VF RL
Sbjct: 213 AIALAKNPVFHDRSKHIDTRYHYIRECIARKDVQVEYVKSQDQIADIFTKPLKQEVFIRL 272
Query: 122 KWMLGMRS 129
+ +G+ S
Sbjct: 273 RNSIGVTS 280