BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3320.1
(339 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP37028.1 Retrovirus-related Pol polyprotein from transposon TN... 288 2e-92
XP_017191027.1 PREDICTED: uncharacterized protein LOC108174503 [... 284 2e-88
XP_008365143.1 PREDICTED: uncharacterized protein LOC103428807 [... 281 1e-87
>KYP37028.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 374
Score = 288 bits (738), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 229/346 (66%), Gaps = 26/346 (7%)
Query: 1 MSNMIQP-QIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCV 59
M+N P Q+P LTK NY++W ++M LLG+ D+W++V+ G+ EP E ++ QK
Sbjct: 1 MANTGVPFQVPMLTKSNYDNWSLRMVALLGAHDVWEVVEKGHTEPENVES--LSQAQKDS 58
Query: 60 LKDSRKMDKKALFLIYQGIDSPTFEKVSEAKSSKEAWNILKNSFRGVDKLVKVRLQILRG 119
L+DSRK DKKAL LIYQG+D TFEK+S K++KEAW LK S++G D++ KVRLQ LRG
Sbjct: 59 LRDSRKRDKKALCLIYQGLDEDTFEKISGVKTAKEAWEKLKISYKGADQVKKVRLQTLRG 118
Query: 120 EFERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEE 179
EFE L M EGELVSDY SRVL+ N +KR GEK DDVR+MEKILRSL PKF+++V + EE
Sbjct: 119 EFEALHMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKILRSLDPKFEHIVTITEE 178
Query: 180 SKDLESMTVDELMGTLQIHEQRVNRNVATSSNCSVDQVLQAKL-TLEEKQYTPQKERGY- 237
+KDLE+M++++L+G+LQ +E++ + V+QV +A + + +E+ Q R Y
Sbjct: 179 TKDLEAMSIEQLLGSLQAYEEKKKKKEEI-----VEQVFKAHVDSRKEENAHNQSRRSYS 233
Query: 238 ESYGRGYDNGRRGFGNQRGRNFFNRGKTNEP--RGRGRGNFTRAYNSQGRDKRDIECYNC 295
+ GRG R +G+ +GR N + E RGRGRGN Y DK I+CYNC
Sbjct: 234 QEQGRG-----RAYGHGQGRRPNNNNQRGESSNRGRGRGNPNSRY-----DKSRIKCYNC 283
Query: 296 HKLGHYSNECWY--KNQVKEESNLVEDEVEINVDPTLLFSCDGFDE 339
+K GHY++EC KN+V+E++N E+ + D TLL + G D+
Sbjct: 284 NKFGHYASECRAPNKNKVEEKANYAEERCQ--EDGTLLLAYKGQDK 327
>XP_017191027.1 PREDICTED: uncharacterized protein LOC108174503 [Malus domestica]
Length = 533
Score = 284 bits (726), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 215/332 (64%), Gaps = 20/332 (6%)
Query: 2 SNMIQPQIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCVLK 61
SN++Q Q+P L KENYE WCIQ L GSQ+LWDIV +GYV PT E+E+ Q+ LK
Sbjct: 3 SNLVQLQVPTLKKENYERWCIQFKALFGSQELWDIVSSGYVVPTTEQEATYTADQRNTLK 62
Query: 62 DSRKMDKKALFLIYQGIDSPTFEKVSEAKSSKEAWNILKNSFRGVDKLVKVRLQILRGEF 121
D RK D+KAL+L+YQG++ TFEKV++A +SK+ W+ L ++GVD++ KVRLQ LR +F
Sbjct: 63 DLRKKDQKALYLLYQGLEDSTFEKVAKATTSKQVWDTLSTIYKGVDRVKKVRLQSLRADF 122
Query: 122 ERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEESK 181
E MNEGE +SDY SR++ VN+M+R GE+ D+VRV+EKILRSLT KF++VV +EESK
Sbjct: 123 ETAHMNEGESISDYHSRLIVIVNQMRRNGERLDEVRVVEKILRSLTSKFEHVVTAIEESK 182
Query: 182 DLESMTVDELMGTLQIHEQRVNRNVATSSNCSVDQVLQAKLTLEEKQYTPQKERGYESYG 241
DLE+M+ +EL+ +L +HEQR+ +N +S +++Q L++KL +++ P K G
Sbjct: 183 DLEAMSAEELLRSLLVHEQRIQKN---ASPTTLEQALESKLNIDK----PNK-------G 228
Query: 242 RGYDNGRRGFGNQRGRNFFNRGKTNEPRGRGRGNFTRAYNSQGRDKRDIECYNCHKLGHY 301
RG N R G + R R + RG+ R+ R K I+C+ C + GHY
Sbjct: 229 RGQWNSRHGSSSNRSRGRARGRGRGYEQNRGQSQEWRS----TRGKAHIQCHTCKQYGHY 284
Query: 302 SNECWYKNQVKEESNLVEDEVEINVDPTLLFS 333
+NEC YKN E N+ E + T+L +
Sbjct: 285 ANECSYKN--GEHVNMAESNGNAGEEFTVLLA 314
>XP_008365143.1 PREDICTED: uncharacterized protein LOC103428807 [Malus domestica]
Length = 506
Score = 281 bits (718), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 214/332 (64%), Gaps = 20/332 (6%)
Query: 2 SNMIQPQIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCVLK 61
SN++Q Q+P L KENYE WCIQ L GS +LW++V NGYV PT ++E+ Q+ LK
Sbjct: 3 SNLVQLQVPTLKKENYERWCIQFKALFGSPELWEVVSNGYVVPTADQEAAYTAEQRNTLK 62
Query: 62 DSRKMDKKALFLIYQGIDSPTFEKVSEAKSSKEAWNILKNSFRGVDKLVKVRLQILRGEF 121
D RK D+K L+L+YQG++ TFEKV+EA +SK+ W+ L ++GVD++ KVRLQ LR +F
Sbjct: 63 DLRKKDQKTLYLLYQGLEDSTFEKVAEATTSKQVWDTLSTIYKGVDRVKKVRLQSLRADF 122
Query: 122 ERLSMNEGELVSDYVSRVLSNVNEMKRCGEKCDDVRVMEKILRSLTPKFDNVVIVVEESK 181
E MNEGE +SDY SR++ VN+M+ GE+ D+VRV+EKILRSLT KF++VV +EESK
Sbjct: 123 ETAHMNEGESISDYHSRLIVVVNQMRINGERLDEVRVVEKILRSLTSKFEHVVTAIEESK 182
Query: 182 DLESMTVDELMGTLQIHEQRVNRNVATSSNCSVDQVLQAKLTLEEKQYTPQKERGYESYG 241
DLE+M+ +EL+G+L +HEQR+ +N + +++Q L++KL ++ K G G
Sbjct: 183 DLEAMSAEELLGSLLVHEQRIQKNARPT---TLEQALKSKLNID-------KPNG----G 228
Query: 242 RGYDNGRRGFGNQRGRNFFNRGKTNEPRGRGRGNFTRAYNSQGRDKRDIECYNCHKLGHY 301
RG N RRG + R R + RG+ R+ R K I+C++C + GHY
Sbjct: 229 RGQWNSRRGNSSNRSRGRARGRGRGYAQNRGQSQEWRS----TRGKAHIQCHSCKQYGHY 284
Query: 302 SNECWYKNQVKEESNLVEDEVEINVDPTLLFS 333
+NEC YKN E N+VE + T+L +
Sbjct: 285 ANECSYKN--GEHVNMVESSGNAGEEFTVLLA 314