BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3420.1
(167 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010277300.1 PREDICTED: transcription initiation factor TFIID ... 256 1e-81
XP_011624660.1 PREDICTED: transcription initiation factor TFIID ... 243 9e-77
XP_015952623.1 PREDICTED: transcription initiation factor TFIID ... 241 1e-76
>XP_010277300.1 PREDICTED: transcription initiation factor TFIID subunit 15
[Nelumbo nucifera]
Length = 427
Score = 256 bits (653), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 133/164 (81%), Positives = 148/164 (90%), Gaps = 1/164 (0%)
Query: 1 MANYTGKRDPSNGSVYVCNLPQGTDEDMLAEFFGTIGLLKKDKRTGRPKIWFYRDKVTNE 60
MA+Y+GK P NGSVYVCNLP GTDE+MLAE+FGTIGLLKKDKRTGRPKIW YRDKVTNE
Sbjct: 1 MASYSGKGGPPNGSVYVCNLPHGTDENMLAEYFGTIGLLKKDKRTGRPKIWLYRDKVTNE 60
Query: 61 PKGDATVTYEDPHAALAAVEWFNNKDFHGSTIGVFIAESKNKDDVSYNSGHQIQHIEDTV 120
PKGDATVTYEDPHAALAAVEWFNN+DFHGSTIGVFIAESK+KDD +YNSG+Q+ H ED
Sbjct: 61 PKGDATVTYEDPHAALAAVEWFNNRDFHGSTIGVFIAESKSKDDHTYNSGNQMNHGEDPN 120
Query: 121 VGDDFGGQVDDAGNMN-GGGRGGGRGDASGKAWQQDGDWMCPNT 163
+ DFGGQ +DA ++N GGGRG GRGDASGKAWQQ+GDW+CPNT
Sbjct: 121 LTGDFGGQGEDARDVNGGGGRGRGRGDASGKAWQQEGDWLCPNT 164
>XP_011624660.1 PREDICTED: transcription initiation factor TFIID subunit 15 isoform
X1 [Amborella trichopoda]
Length = 418
Score = 243 bits (620), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 132/171 (77%), Positives = 141/171 (82%), Gaps = 5/171 (2%)
Query: 1 MANYTGKRDPSNGSVYVCNLPQGTDEDMLAEFFGTIGLLKKDKRTGRPKIWFYRDKVTNE 60
MA + G DPSNGS+YVCNLP GTDE MLAEFFGTIGL+KKDKRTGRPKIW YRDKVTNE
Sbjct: 1 MAKHLGGGDPSNGSIYVCNLPPGTDEVMLAEFFGTIGLIKKDKRTGRPKIWLYRDKVTNE 60
Query: 61 PKGDATVTYEDPHAALAAVEWFNNKDFHGSTIGVFIAESKNKDDV--SYNSG--HQIQHI 116
PKGDATVTYEDPHAALAAVEWFNNKDFHGSTIGVFIAESK+KD V YNSG HQ H
Sbjct: 61 PKGDATVTYEDPHAALAAVEWFNNKDFHGSTIGVFIAESKSKDSVDNQYNSGISHQSDHA 120
Query: 117 EDTVVGDDFGGQVDDAGNMN-GGGRGGGRGDASGKAWQQDGDWMCPNTRSV 166
D V D G Q +D G +N GGGRG GRGDASGKAWQQ+GDW+CPN+ S
Sbjct: 121 ADQSVAGDLGDQEEDGGELNDGGGRGRGRGDASGKAWQQEGDWLCPNSSSC 171
>XP_015952623.1 PREDICTED: transcription initiation factor TFIID subunit 15
[Arachis duranensis]
Length = 380
Score = 241 bits (616), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 119/164 (72%), Positives = 136/164 (82%), Gaps = 7/164 (4%)
Query: 1 MANYTGKRDPSNGSVYVCNLPQGTDEDMLAEFFGTIGLLKKDKRTGRPKIWFYRDKVTNE 60
MA++ GK PSNGSVYVCNLP GTDE MLAE+FGTIGL+KKDKRTGRPKIW YRDK TNE
Sbjct: 1 MASHQGKVPPSNGSVYVCNLPFGTDETMLAEYFGTIGLIKKDKRTGRPKIWLYRDKETNE 60
Query: 61 PKGDATVTYEDPHAALAAVEWFNNKDFHGSTIGVFIAESKNKDDVSYNSGHQIQHIEDTV 120
PKGDATVTYEDPHAA+AAVEWFNNKDFHGSTIGVFIAESKNKD+ +YNS + +
Sbjct: 61 PKGDATVTYEDPHAAVAAVEWFNNKDFHGSTIGVFIAESKNKDEQAYNS------VAEPA 114
Query: 121 VGDDFGGQVDDAGNMNGG-GRGGGRGDASGKAWQQDGDWMCPNT 163
V + GG + ++NGG GRG G+ D+SGKAWQQ+GDW+CPNT
Sbjct: 115 VAGNVGGLEETTRDVNGGSGRGRGQIDSSGKAWQQEGDWLCPNT 158