BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000058.1_g3480.1
(326 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing pr... 461 e-158
XP_006481967.1 PREDICTED: pentatricopeptide repeat-containing pr... 432 e-146
JAT53560.1 Pentatricopeptide repeat-containing protein At5g66520... 431 e-146
>XP_010277322.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277323.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277324.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277325.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera] XP_010277326.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Nelumbo nucifera]
Length = 539
Score = 461 bits (1187), Expect = e-158, Method: Compositional matrix adjust.
Identities = 216/302 (71%), Positives = 257/302 (85%), Gaps = 1/302 (0%)
Query: 4 PFAKYLKSNKRTLTYLDQPWLTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGDL 63
P KY+KS+ R L+ L+ LTM++I+QIQSHLI+SGT+ DPYAAGKIIAF AISD GDL
Sbjct: 3 PLIKYVKSSNRALSLLEL-CLTMREIRQIQSHLIVSGTICDPYAAGKIIAFCAISDLGDL 61
Query: 64 DYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVLRAC 123
++A+ LFRHLP+ +TFIWNTMIRAF+ER +P KA LYKQML GLLPNNYTFSF+L+A
Sbjct: 62 NHAYLLFRHLPHRTTFIWNTMIRAFAERKEPAKAILLYKQMLQSGLLPNNYTFSFLLKAS 121
Query: 124 TDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWT 183
DL+ + G HSQ+VRLGWE YDFVQNGLIH+YANCDCI ARKLFD S N DVISWT
Sbjct: 122 VDLSSIWLGLKFHSQVVRLGWECYDFVQNGLIHLYANCDCIANARKLFDRSLNPDVISWT 181
Query: 184 AMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKP 243
A+ISGY K GQLE+AR++F+KMPERN VSWSA+ITGY QVG F+E+L+LFNEMQ AG +P
Sbjct: 182 AVISGYCKSGQLEIARQLFEKMPERNAVSWSAMITGYAQVGKFRESLELFNEMQHAGFQP 241
Query: 244 NHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETARQQI 303
NHAGIVGAL+AC FLGALDQG+W H+Y+DRNK++LDRILGTAL+DMY+KCGCI+TARQ
Sbjct: 242 NHAGIVGALSACAFLGALDQGRWIHAYVDRNKMELDRILGTALVDMYSKCGCIDTARQVF 301
Query: 304 ME 305
E
Sbjct: 302 NE 303
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 25/290 (8%)
Query: 55 SAISDHGDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNY 114
S G L+ A LF +P + W+ MI +++ + ++ L+ +M G PN+
Sbjct: 185 SGYCKSGQLEIARQLFEKMPERNAVSWSAMITGYAQVGKFRESLELFNEMQHAGFQPNHA 244
Query: 115 TFSFVLRACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDIS 174
L AC L G H+ + R E + L+ MY+ C CID AR++F+
Sbjct: 245 GIVGALSACAFLGALDQGRWIHAYVDRNKMELDRILGTALVDMYSKCGCIDTARQVFNEM 304
Query: 175 SNRDVISWTAMISGYVKIGQLEMAREMFDKMPERNV----VSWSAIITGYVQVGLFKEAL 230
RDV ++T+MISG GQ A E+F +M + V V++ +++ ++GL +E L
Sbjct: 305 PERDVYTFTSMISGLSNHGQSASAIELFVEMQKEGVKPNEVTFICVLSACSRMGLVEEGL 364
Query: 231 QLFNEM-QLAGIKP--NHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALI 287
+ FN M ++ I P H G + L G G L++ K + ++ D + AL+
Sbjct: 365 RFFNSMTEVYAINPGVEHYGCLVDLL--GRAGMLEEAK---KVVTEMPMEPDSYVLGALL 419
Query: 288 DMYAKCGCIETARQQIME---------GVKVQLSCLL----RWEKMELIR 324
+ G +E ++ + GV V LS + +WE +E++R
Sbjct: 420 NACRVHGNVELGKETVGSLMDRSLDHGGVHVLLSNIYASANQWEVVEMVR 469
>XP_006481967.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 546
Score = 432 bits (1111), Expect = e-146, Method: Compositional matrix adjust.
Identities = 200/294 (68%), Positives = 243/294 (82%), Gaps = 1/294 (0%)
Query: 6 AKYLKSNKRTLTYLDQPWLTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHGDLDY 65
+K LK++KR+++ LDQ L MKQIKQIQSHL +SGTL DP+A GKII F + SD GDL +
Sbjct: 6 SKILKASKRSVSLLDQ-CLNMKQIKQIQSHLTVSGTLWDPFAVGKIIGFCSASDIGDLSH 64
Query: 66 AHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVLRACTD 125
+ LF L +TFIWNTMIR F+E+N+PIKAF LYKQML LPNNYTFSF+LRAC D
Sbjct: 65 GYRLFVCLQYRTTFIWNTMIRGFAEKNEPIKAFALYKQMLRSDFLPNNYTFSFILRACAD 124
Query: 126 LTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVISWTAM 185
+ F G + H+Q++RLGWE+YDFV NGL+H+YA C+C+D ARKLFD+S NRDVISWT++
Sbjct: 125 TSCLFVGLICHAQVIRLGWESYDFVLNGLLHLYATCNCMDPARKLFDMSVNRDVISWTSL 184
Query: 186 ISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGIKPNH 245
I+GY K GQ+ +AR+MFDKMPE+N +SWSA+I GYVQV LFKEAL+ FN MQL G +PNH
Sbjct: 185 INGYAKSGQISIARQMFDKMPEKNAISWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNH 244
Query: 246 AGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETA 299
AGIVGALTAC FLGALDQG+W H+Y+DRN I+LD ILGTA+IDMYAKCGCIETA
Sbjct: 245 AGIVGALTACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETA 298
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
Query: 61 GDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVL 120
G + A +F +P + W+ MI + + + +A + M G PN+ L
Sbjct: 192 GQISIARQMFDKMPEKNAISWSAMINGYVQVDLFKEALEHFNYMQLCGFRPNHAGIVGAL 251
Query: 121 RACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVI 180
AC L G H+ + R G E + +I MYA C CI+ A +FD NRDV
Sbjct: 252 TACAFLGALDQGRWIHAYVDRNGIELDIILGTAIIDMYAKCGCIETACSVFDSMPNRDVF 311
Query: 181 SWTAMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAG 240
++T++ISG Q S SAI +LF MQL G
Sbjct: 312 AYTSLISGLANHDQ-----------------SASAI--------------ELFMRMQLEG 340
Query: 241 IKPNHAGIVGALTACGFLGALDQG-KWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETA 299
+ PN + L AC +G +DQG + F S + I+ L+D+ + G +E A
Sbjct: 341 VVPNEVTFICVLNACSRMGLVDQGLRIFKSMSEIYGIEPGVQHYGCLVDLLGRAGMLEAA 400
Query: 300 RQQIME 305
++ + E
Sbjct: 401 KKVVRE 406
>JAT53560.1 Pentatricopeptide repeat-containing protein At5g66520 [Anthurium
amnicola]
Length = 546
Score = 431 bits (1109), Expect = e-146, Method: Compositional matrix adjust.
Identities = 202/300 (67%), Positives = 239/300 (79%)
Query: 2 LHPFAKYLKSNKRTLTYLDQPWLTMKQIKQIQSHLILSGTLTDPYAAGKIIAFSAISDHG 61
L P A+ LK +KRTL+ L + L M IKQI +HL++SG + D Y AGKI+AF AIS+ G
Sbjct: 6 LPPVARCLKPDKRTLSLLQRCNLNMAGIKQIHAHLVVSGAVADTYVAGKILAFCAISERG 65
Query: 62 DLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLGFGLLPNNYTFSFVLR 121
DL +AH LFR LP P+ F+WNT++RA ER +P A LY +ML G LPNNYTFSF LR
Sbjct: 66 DLAHAHLLFRGLPRPTIFLWNTLMRAHVERREPCAAIALYGRMLADGYLPNNYTFSFALR 125
Query: 122 ACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDYARKLFDISSNRDVIS 181
AC DL+ G H+QIV++GWE YDFVQNGLIHMYA+C CID ARK+FD S +RDVIS
Sbjct: 126 ACLDLSALTDGRKLHAQIVKIGWEPYDFVQNGLIHMYASCGCIDSARKVFDHSLSRDVIS 185
Query: 182 WTAMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLFKEALQLFNEMQLAGI 241
WTAM+ GY K GQ+E AR +FD+MP RN VSWSA+ITGYVQ+ LF+EAL LFNEMQLAG+
Sbjct: 186 WTAMVHGYAKSGQIEEARRLFDRMPARNAVSWSAMITGYVQIELFQEALVLFNEMQLAGV 245
Query: 242 KPNHAGIVGALTACGFLGALDQGKWFHSYIDRNKIQLDRILGTALIDMYAKCGCIETARQ 301
PNHAGIVGALTAC FLGALDQG+W HSY++RNK++LDRILGTALIDMYAKCGCIETA Q
Sbjct: 246 HPNHAGIVGALTACAFLGALDQGRWIHSYVERNKLELDRILGTALIDMYAKCGCIETAWQ 305
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 36/260 (13%)
Query: 51 IIAFSAI----SDHGDLDYAHHLFRHLPNPSTFIWNTMIRAFSERNQPIKAFCLYKQMLG 106
+I+++A+ + G ++ A LF +P + W+ MI + + +A L+ +M
Sbjct: 183 VISWTAMVHGYAKSGQIEEARRLFDRMPARNAVSWSAMITGYVQIELFQEALVLFNEMQL 242
Query: 107 FGLLPNNYTFSFVLRACTDLTDGFTGSVAHSQIVRLGWETYDFVQNGLIHMYANCDCIDY 166
G+ PN+ L AC F G++ + W IH Y + ++
Sbjct: 243 AGVHPNHAGIVGALTACA-----FLGALDQGR-----W----------IHSYVERNKLEL 282
Query: 167 ARKLFDISSNRDVISWTAMISGYVKIGQLEMAREMFDKMPERNVVSWSAIITGYVQVGLF 226
D I TA+I Y K G +E A ++F +MPER+V +++++I+G+ GL
Sbjct: 283 -----------DRILGTALIDMYAKCGCIETAWQVFCQMPERDVFAYTSMISGFSNHGLS 331
Query: 227 KEALQLFNEMQLAGIKPNHAGIVGALTACGFLGALDQGK-WFHSYIDRNKIQLDRILGTA 285
++A++LF +MQ +KPN ++ LTAC +G + +GK +F + IQ
Sbjct: 332 RKAIELFAKMQNDDVKPNEVTLISVLTACSRMGLVAEGKNFFENMSSAYGIQPGLEHYGC 391
Query: 286 LIDMYAKCGCIETARQQIME 305
L+D+ + G + A + + E
Sbjct: 392 LVDLLGRAGLLGEATRVVRE 411