BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000058.1_g3540.1
         (144 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP56587.1 Retrovirus-related Pol polyprotein from transposon TN...   119   7e-32
KYP42944.1 Retrovirus-related Pol polyprotein from transposon TN...   119   7e-32
CAN66809.1 hypothetical protein VITISV_010919 [Vitis vinifera]        128   1e-31

>KYP56587.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 128

 Score =  119 bits (297), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 6/113 (5%)

Query: 1   MENMVRMISLNGANYHLWKGKMEDLLFVKEFHAAVFHEKKPDEKTEDQRATEDQWALLHR 60
           ME   +M+ LNG NYHLWKGKM+DLLFVK+ H  VF  +KPD        +E++W   H+
Sbjct: 2   MEANTKMVPLNGTNYHLWKGKMKDLLFVKKMHLPVFATQKPDS------MSEEEWDFEHQ 55

Query: 61  QVCCLMRQWIDDNVLHDIENETNARLLWLKLEQLFAWKTANNKMYTVKKLLGI 113
           QVC  +RQ+++DNV + I NET+AR LW K+E L+A K+ NNK+Y +  L+ +
Sbjct: 56  QVCGFIRQFVEDNVYNHIANETHARALWEKIESLYASKSRNNKLYLLNCLMNL 108


>KYP42944.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 153

 Score =  119 bits (299), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 6/113 (5%)

Query: 1   MENMVRMISLNGANYHLWKGKMEDLLFVKEFHAAVFHEKKPDEKTEDQRATEDQWALLHR 60
           ME   +MI+LNG NYHLWKGKM+DLLFVK+ H  VF  +KPD        +E+ W   H+
Sbjct: 2   MEANTKMIALNGTNYHLWKGKMKDLLFVKKMHLPVFTTQKPDS------MSEEDWDFEHQ 55

Query: 61  QVCCLMRQWIDDNVLHDIENETNARLLWLKLEQLFAWKTANNKMYTVKKLLGI 113
           QVC  +RQ+++DNV + I NET+AR LW K+E L+A K+ NNK Y +  L+ +
Sbjct: 56  QVCGFIRQFVEDNVYNHIANETHARTLWEKIESLYASKSGNNKFYLLNCLINL 108


>CAN66809.1 hypothetical protein VITISV_010919 [Vitis vinifera]
          Length = 1183

 Score =  128 bits (321), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 82/111 (73%), Gaps = 6/111 (5%)

Query: 3   NMVRMISLNGANYHLWKGKMEDLLFVKEFHAAVFHEKKPDEKTEDQRATEDQWALLHRQV 62
           N  RMI++NG+NYH+WKGKMEDLL+ K+++  VF  +KP+ KT+ +      W LLHR V
Sbjct: 4   NTSRMITVNGSNYHVWKGKMEDLLYAKDYYLLVFASEKPENKTDAK------WDLLHRHV 57

Query: 63  CCLMRQWIDDNVLHDIENETNARLLWLKLEQLFAWKTANNKMYTVKKLLGI 113
           C  +RQW+D+NVL+ +  E +AR LW KLEQL+A KT NNK++ +KK++ +
Sbjct: 58  CGYIRQWVDNNVLNHVSEEKHARSLWNKLEQLYARKTGNNKLFLIKKMISL 108

Top